Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_2312 |
Symbol | |
ID | 5870101 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 2576789 |
End bp | 2577439 |
Gene Length | 651 bp |
Protein Length | 216 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641547437 |
Product | hypothetical protein |
Protein accession | YP_001668549 |
Protein GI | 167033318 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 0.728668 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAACCC TCGACCGCCT GTTGCTCGGC AGCGGCCTGC TGATACCCCT CTGGCTGTTG GCAGGGGTAT GGCTCACCGC CCTGGCGTAC CCCGGCTACG ACCACCTGCA ACAGGCCATG AGCCAGCTGG GTGCGACAGG CTCGCCAACC CACAGCTGGT CGCCACTGCT CAACAATTTT CCCTTGGCCG GGTTGTTCGG CCTGTTTGCC TGGGGCCTCG CCCGACGCTG GCGTGGCTCG AAGCTGGCGC TGCTGAGTGC CGGCCTGGTG TTGCTGCATG GCATCGGCAG CCTGGGAACC GGGTGGTTCC CTTGCGATCA GGGTTGCGCA CCGACACAGC CATCCACCGC CCAGCAACTG CATAACCTGT CCGGCTTGCT GATGTTCCTC TCCCTGACCG TTGCCAGCGC CCTCTGGGCA TGGCAGGGCA GCCGCATTGC TGGCTCGCCT GCATTTGCGC TGTTTTCTCT GGTCTGTGTA GTGCTGGCGA TCGTCACCGT CATACTGATG GGCCAGGCGG CCCAAAGCGG CCAGCTGTTC GGCCTGTATC AGCGCCTGAA CTATGGTGTG TCGGTGATCT GGGTCGCCAG CCTGGCGTGG ATCAGCCTGC GCAAGCCTGC TGCCAGCCCG CTGCGCATGG CCATATTCTG A
|
Protein sequence | MKTLDRLLLG SGLLIPLWLL AGVWLTALAY PGYDHLQQAM SQLGATGSPT HSWSPLLNNF PLAGLFGLFA WGLARRWRGS KLALLSAGLV LLHGIGSLGT GWFPCDQGCA PTQPSTAQQL HNLSGLLMFL SLTVASALWA WQGSRIAGSP AFALFSLVCV VLAIVTVILM GQAAQSGQLF GLYQRLNYGV SVIWVASLAW ISLRKPAASP LRMAIF
|
| |