10 homologs were found in PanDaTox collection
for query gene Shewana3_4177 on replicon NC_008573
Organism: Shewanella sp. ANA-3



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008573  Shewana3_4177  CBS domain-containing protein  100 
 
 
224 aa  456  1e-127  Shewanella sp. ANA-3  Bacteria  normal  0.0451458  normal  0.0529538 
 
 
-
 
NC_009997  Sbal195_2734  CBS domain-containing protein  81.19 
 
 
202 aa  355  1.9999999999999998e-97  Shewanella baltica OS195  Bacteria  normal  0.55077  normal  0.387641 
 
 
-
 
NC_010506  Swoo_2638  CBS domain-containing protein  74.63 
 
 
201 aa  332  2e-90  Shewanella woodyi ATCC 51908  Bacteria  normal  0.0564346  normal  0.0743126 
 
 
-
 
NC_007954  Sden_2084  hypothetical protein  63.02 
 
 
201 aa  251  5.000000000000001e-66  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_007912  Sde_3270  CBS  51.58 
 
 
200 aa  197  2.0000000000000003e-49  Saccharophagus degradans 2-40  Bacteria  normal  normal  0.0245194 
 
 
-
 
NC_010322  PputGB1_2312  hypothetical protein  34.69 
 
 
216 aa  130  1.0000000000000001e-29  Pseudomonas putida GB-1  Bacteria  normal  0.728668  normal 
 
 
-
 
NC_009512  Pput_3103  hypothetical protein  33.5 
 
 
216 aa  120  1.9999999999999998e-26  Pseudomonas putida F1  Bacteria  normal  0.572416  normal 
 
 
-
 
NC_010501  PputW619_2819  hypothetical protein  31.98 
 
 
216 aa  116  3e-25  Pseudomonas putida W619  Bacteria  normal  0.0457027  normal 
 
 
-
 
NC_007954  Sden_2114  hypothetical protein  54.79 
 
 
88 aa  68.6  0.00000000008  Shewanella denitrificans OS217  Bacteria  hitchhiker  0.00228515  n/a   
 
 
-
 
NC_008541  Arth_0964  hypothetical protein  25.24 
 
 
226 aa  43.1  0.004  Arthrobacter sp. FB24  Bacteria  normal  0.871923  n/a   
 
 
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