8 homologs were found in PanDaTox collection
for query gene Rpic_5036 on replicon NC_010683
Organism: Ralstonia pickettii 12J



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010683  Rpic_5036  hypothetical protein  100 
 
 
137 aa  273  6e-73  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_012851  Rpic12D_5442  hypothetical protein  92.59 
 
 
137 aa  249  1e-65  Ralstonia pickettii 12D  Bacteria  normal  0.989966  n/a   
 
 
-
 
NC_012851  Rpic12D_5443  hypothetical protein  39.58 
 
 
123 aa  79.3  0.00000000000001  Ralstonia pickettii 12D  Bacteria  normal  0.877927  n/a   
 
 
-
 
NC_010683  Rpic_5037  hypothetical protein  44.59 
 
 
123 aa  69.3  0.00000000002  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_004578  PSPTO_4132  repressor protein c2, putative  30.77 
 
 
217 aa  46.2  0.0001  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_3869  peptidase  30.77 
 
 
218 aa  45.8  0.0002  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_010622  Bphy_1911  putative phage repressor  36.51 
 
 
331 aa  42  0.003  Burkholderia phymatum STM815  Bacteria  normal  0.0192387  normal  0.0833716 
 
 
-
 
NC_007948  Bpro_3749  hypothetical protein  28.05 
 
 
210 aa  41.2  0.005  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
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