10 homologs were found in PanDaTox collection
for query gene Rpic12D_5442 on replicon NC_012851
Organism: Ralstonia pickettii 12D



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_012851  Rpic12D_5442  hypothetical protein  100 
 
 		 137 aa  270  4.0000000000000004e-72  Ralstonia pickettii 12D  Bacteria  normal  0.989966  n/a   
 
 
-
 
NC_010683  Rpic_5036  hypothetical protein  92.59 
 
 		 137 aa  249  1e-65  Ralstonia pickettii 12J  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012851  Rpic12D_5443  hypothetical protein  37.61 
 
 		 123 aa  78.6  0.00000000000003  Ralstonia pickettii 12D  Bacteria  normal  0.877927  n/a   
 
 
-
 
NC_010683  Rpic_5037  hypothetical protein  44.44 
 
 		 123 aa  68.6  0.00000000003  Ralstonia pickettii 12J  Bacteria  normal  1  normal  1 
 
 
-
 
NC_004578  PSPTO_4132  repressor protein c2, putative  30.77 
 
 		 217 aa  46.2  0.0002  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  1  n/a   
 
 
-
 
NC_007005  Psyr_3869  peptidase  30.77 
 
 		 218 aa  45.8  0.0002  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  1  normal  1 
 
 
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NC_008686  Pden_1842  heavy metal translocating P-type ATPase  30.77 
 
 		 732 aa  43.9  0.0008  Paracoccus denitrificans PD1222  Bacteria  normal  0.21425  normal  0.57874 
 
 
-
 
NC_007948  Bpro_3749  hypothetical protein  28.57 
 
 		 210 aa  41.6  0.004  Polaromonas sp. JS666  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010622  Bphy_1911  putative phage repressor  42.55 
 
 		 331 aa  41.6  0.004  Burkholderia phymatum STM815  Bacteria  normal  0.0192387  normal  0.0833716 
 
 
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NC_007347  Reut_A2380  peptidase S24, S26A and S26B  26.47 
 
 		 421 aa  40.8  0.007  Ralstonia eutropha JMP134  Bacteria  hitchhiker  0.00000103067  n/a   
 
 
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