4 homologs were found in PanDaTox collection
for query gene Rpic12D_2279 on replicon NC_012856
Organism: Ralstonia pickettii 12D



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_012856  Rpic12D_2279  hypothetical protein  100 
 
 
277 aa  574  1.0000000000000001e-163  Ralstonia pickettii 12D  Bacteria  hitchhiker  0.00172266  hitchhiker  0.0000000130114 
 
 
-
 
NC_013889  TK90_1231  hypothetical protein  50 
 
 
293 aa  152  4e-36  Thioalkalivibrio sp. K90mix  Bacteria  normal  0.446954  normal  0.253357 
 
 
-
 
NC_009436  Ent638_2262  Pyocin large subunit-like protein  30.3 
 
 
310 aa  73.6  0.000000000004  Enterobacter sp. 638  Bacteria  decreased coverage  0.00000537713  unclonable  0.00000275213 
 
 
-
 
NC_010002  Daci_3219  hypothetical protein  36.67 
 
 
266 aa  71.2  0.00000000002  Delftia acidovorans SPH-1  Bacteria  normal  0.242742  normal  0.443173 
 
 
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