7 homologs were found in PanDaTox collection
for query gene TK90_1231 on replicon NC_013889
Organism: Thioalkalivibrio sp. K90mix



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013889  TK90_1231  hypothetical protein  100 
 
 
293 aa  600  1.0000000000000001e-171  Thioalkalivibrio sp. K90mix  Bacteria  normal  0.446954  normal  0.253357 
 
 
-
 
NC_012856  Rpic12D_2279  hypothetical protein  54.81 
 
 
277 aa  146  4.0000000000000006e-34  Ralstonia pickettii 12D  Bacteria  hitchhiker  0.00172266  hitchhiker  0.0000000130114 
 
 
-
 
NC_010658  SbBS512_E2159  replication protein  49.54 
 
 
274 aa  105  1e-21  Shigella boydii CDC 3083-94  Bacteria  hitchhiker  0.000201859  n/a   
 
 
-
 
NC_011353  ECH74115_1152  hypothetical protein  52.33 
 
 
400 aa  93.6  4e-18  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  normal  0.303869 
 
 
-
 
NC_012791  Vapar_2457  hypothetical protein  31.48 
 
 
285 aa  91.7  1e-17  Variovorax paradoxus S110  Bacteria  normal  0.0102672  n/a   
 
 
-
 
NC_009436  Ent638_2262  Pyocin large subunit-like protein  34.4 
 
 
310 aa  72.8  0.000000000006  Enterobacter sp. 638  Bacteria  decreased coverage  0.00000537713  unclonable  0.00000275213 
 
 
-
 
NC_007510  Bcep18194_A5241  hypothetical protein  46.25 
 
 
151 aa  56.6  0.0000005  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
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