| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_2279 |
|---|
| Symbol | |
|---|
| ID | 8019943 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12D |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012856 |
|---|
| Strand | - |
|---|
| Start bp | 2411776 |
|---|
| End bp | 2412609 |
|---|
| Gene Length | 834 bp |
|---|
| Protein Length | 277 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 644831062 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002982225 |
|---|
| Protein GI | 241663865 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.00172266 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 2 |
|---|
| Fosmid unclonability p-value | 0.0000000130114 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGGCA ACTGGATCAA GTTCGAGGTC GACACGCCGG AGAAGCCGGA GGTGTTGGCT
TTGACCGTCG CGATGGGCTG GGACGATCCT GATTTGACCG TTGGCAAGCT GCTGCGTGTC
TGGCGCTGGT TCGATCAGCA TACGCTTGAA GGTAACGCTC CCGGCGTTAG CGCCGCGTTA
CTGGATCGCA TCGCAGGCGT TACCGGATTC TCAACAGAGA TGGCCAAAGT GGGCTGGCTG
ATCGTTTCCG ACGATGGAAT TTCGCTTCCG AACTTCGATC GGCACAACGG CGAGACCGCA
AAAAGCCGTG CTTTGACGGC AAAGCGCGTC GCGAAGCACA AGGCTAACTC GAAAGGTAAC
GATGCTGGTA ACGCTGACAG CGTTACTTCG CCGTTACCTA AAGAAGATAA GAATAAAGAA
GAAGTAAACA ATCCCCCCAA CCCCCCATCG CCTACCGGCG ACGAGGGGGC TGAGACCAAA
GCCGAGAAAA AACCCAAGCG GGAACGTAAG CCGCGCACCG CACTGAAGAC CTTCCTCGCT
GCCTGCAGGG CAAACGGGGT GAAGCCAGTG ACGACGTATG CGCCGCTCAT GGAGTACGTG
GAAGGTGTTG GCCTGCCGGC CGACTTTCTC GAGCTGGCGT GGGATGTGTT CTGCCATGAG
CACATGGACG GTGGCGCAAA TGCTGCACGG TTGCAAGCCG ACTGGCAGCG CCATTTCGCG
AACTACGTCA CCAAGGGCTA CTACCGCCTT TGGGTCTGCA AGCCCGACGG GACTTTTGAA
CTCACCAGCA CCGGCCAGCA GGCCCGGCGC TTCCACAAGC AGGAGGCGGC ATGA
|
|---|
| Protein sequence | MAGNWIKFEV DTPEKPEVLA LTVAMGWDDP DLTVGKLLRV WRWFDQHTLE GNAPGVSAAL
LDRIAGVTGF STEMAKVGWL IVSDDGISLP NFDRHNGETA KSRALTAKRV AKHKANSKGN
DAGNADSVTS PLPKEDKNKE EVNNPPNPPS PTGDEGAETK AEKKPKRERK PRTALKTFLA
ACRANGVKPV TTYAPLMEYV EGVGLPADFL ELAWDVFCHE HMDGGANAAR LQADWQRHFA
NYVTKGYYRL WVCKPDGTFE LTSTGQQARR FHKQEAA
|
|---|
| |