9 homologs were found in PanDaTox collection
for query gene Rpic12D_1604 on replicon NC_012856
Organism: Ralstonia pickettii 12D



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_012856  Rpic12D_1604  TM2 domain containing protein  100 
 
 		 104 aa  209  7e-54  Ralstonia pickettii 12D  Bacteria  normal  0.10102  normal  0.345673 
 
 
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NC_010682  Rpic_1932  TM2 domain containing protein  95.19 
 
 		 104 aa  201  4e-51  Ralstonia pickettii 12J  Bacteria  normal  0.533409  normal  0.0149218 
 
 
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NC_003295  RSc1614  hypothetical protein  77.88 
 
 		 104 aa  170  6.999999999999999e-42  Ralstonia solanacearum GMI1000  Bacteria  normal  0.696869  normal  1 
 
 
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NC_008048  Sala_1089  TM2  43.43 
 
 		 117 aa  72.8  0.000000000002  Sphingopyxis alaskensis RB2256  Bacteria  normal  1  normal  1 
 
 
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NC_008463  PA14_53630  hypothetical protein  40.51 
 
 		 111 aa  64.7  0.0000000004  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.0142273  hitchhiker  0.000532666 
 
 
-
 
NC_009656  PSPA7_4699  hypothetical protein  39.74 
 
 		 111 aa  63.5  0.000000001  Pseudomonas aeruginosa PA7  Bacteria  normal  1  n/a   
 
 
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NC_008686  Pden_2261  TM2 domain-containing protein  36.54 
 
 		 103 aa  52  0.000003  Paracoccus denitrificans PD1222  Bacteria  normal  0.46379  normal  0.197019 
 
 
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NC_013440  Hoch_4937  TM2 domain containing protein  36.46 
 
 		 194 aa  46.2  0.0001  Haliangium ochraceum DSM 14365  Bacteria  normal  1  normal  1 
 
 
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NC_013205  Aaci_2084  TM2 domain containing protein  34.67 
 
 		 76 aa  43.9  0.0007  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  1  n/a   
 
 
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