11 homologs were found in PanDaTox collection
for query gene RoseRS_3018 on replicon NC_009523
Organism: Roseiflexus sp. RS-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009523  RoseRS_3018  hypothetical protein  100 
 
 
125 aa  242  9.999999999999999e-64  Roseiflexus sp. RS-1  Bacteria  normal  0.0293941  normal 
 
 
-
 
NC_009767  Rcas_2681  hypothetical protein  78.26 
 
 
125 aa  193  8.000000000000001e-49  Roseiflexus castenholzii DSM 13941  Bacteria  decreased coverage  0.00455306  normal 
 
 
-
 
NC_009972  Haur_0693  hypothetical protein  52.8 
 
 
129 aa  145  2.0000000000000003e-34  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_010424  Daud_1825  hypothetical protein  53.97 
 
 
126 aa  134  3.0000000000000003e-31  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_1940  hypothetical protein  53.17 
 
 
128 aa  127  6e-29  Chloroflexus aggregans DSM 9485  Bacteria  normal  hitchhiker  0.000194852 
 
 
-
 
NC_008346  Swol_2531  hypothetical protein  46.46 
 
 
101 aa  92  2e-18  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  0.660934  n/a   
 
 
-
 
NC_010831  Cphamn1_2335  hypothetical protein  39.53 
 
 
191 aa  82.8  0.000000000000002  Chlorobium phaeobacteroides BS1  Bacteria  normal  normal 
 
 
-
 
NC_011729  PCC7424_4294  putative transcriptional regulator  33.85 
 
 
300 aa  79.7  0.00000000000001  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_011060  Ppha_2457  hypothetical protein  29.13 
 
 
190 aa  71.6  0.000000000003  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  0.0663583  n/a   
 
 
-
 
NC_008639  Cpha266_2052  hypothetical protein  29.2 
 
 
190 aa  68.2  0.00000000004  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  0.31699  n/a   
 
 
-
 
NC_010424  Daud_1824  putative transcriptional regulator  33.07 
 
 
304 aa  55.1  0.0000003  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  n/a   
 
 
-
 
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