14 homologs were found in PanDaTox collection
for query gene Rmet_5662 on replicon NC_007974
Organism: Cupriavidus metallidurans CH34



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007974  Rmet_5662  hypothetical protein  100 
 
 
113 aa  238  2e-62  Cupriavidus metallidurans CH34  Bacteria  normal  normal  0.340656 
 
 
-
 
NC_010682  Rpic_2105  hypothetical protein  76.99 
 
 
113 aa  186  7e-47  Ralstonia pickettii 12J  Bacteria  normal  0.0449217  normal  0.946355 
 
 
-
 
NC_012856  Rpic12D_1781  hypothetical protein  76.11 
 
 
113 aa  184  2e-46  Ralstonia pickettii 12D  Bacteria  normal  0.670787  normal  0.597346 
 
 
-
 
NC_003295  RSc1958  hypothetical protein  73.45 
 
 
113 aa  178  2e-44  Ralstonia solanacearum GMI1000  Bacteria  normal  0.237084  normal 
 
 
-
 
NC_012917  PC1_1592  hypothetical protein  69.03 
 
 
109 aa  171  3.9999999999999995e-42  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.0338117  n/a   
 
 
-
 
NC_013421  Pecwa_2870  hypothetical protein  69.03 
 
 
109 aa  170  5.999999999999999e-42  Pectobacterium wasabiae WPP163  Bacteria  normal  0.294622  n/a   
 
 
-
 
NC_007948  Bpro_4237  hypothetical protein  64.6 
 
 
109 aa  160  8.000000000000001e-39  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_009654  Mmwyl1_0973  hypothetical protein  64.6 
 
 
109 aa  159  9e-39  Marinomonas sp. MWYL1  Bacteria  normal  0.784027  normal 
 
 
-
 
NC_008009  Acid345_1329  hypothetical protein  62.83 
 
 
109 aa  159  2e-38  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_007347  Reut_A2349  hypothetical protein  66.37 
 
 
109 aa  157  6e-38  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_010571  Oter_3106  hypothetical protein  59.29 
 
 
109 aa  145  2.0000000000000003e-34  Opitutus terrae PB90-1  Bacteria  normal  normal  0.0637865 
 
 
-
 
NC_008709  Ping_2923  hypothetical protein  52.21 
 
 
114 aa  130  7.999999999999999e-30  Psychromonas ingrahamii 37  Bacteria  normal  normal  0.373188 
 
 
-
 
NC_008009  Acid345_4252  hypothetical protein  55.77 
 
 
76 aa  64.3  0.0000000005  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.818671  normal 
 
 
-
 
NC_013131  Caci_3677  Cupin 2 conserved barrel domain protein  34.26 
 
 
116 aa  45.8  0.0002  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.938127  normal 
 
 
-
 
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