12 homologs were found in PanDaTox collection
for query gene Rmet_0873 on replicon NC_007973
Organism: Cupriavidus metallidurans CH34



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_007973  Rmet_0873  response regulator receiver domain-containing protein  100 
 
 		 137 aa  277  3e-74  Cupriavidus metallidurans CH34  Bacteria  normal  0.0104053  normal  1 
 
 
-
 
NC_007974  Rmet_5861  LuxR family transcriptional regulator  34.21 
 
 		 309 aa  50.4  0.000008  Cupriavidus metallidurans CH34  Bacteria  normal  1  normal  0.971396 
 
 
-
 
NC_006368  lpp2699  transmission activator LetA  24.56 
 
 		 219 aa  50.1  0.00001  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_006369  lpl2571  transmission activator LetA  24.56 
 
 		 219 aa  50.1  0.00001  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_007348  Reut_B5380  regulatory protein, LuxR  34.21 
 
 		 315 aa  47.8  0.00005  Ralstonia eutropha JMP134  Bacteria  normal  0.869493  n/a   
 
 
-
 
NC_010627  Bphy_7761  two component LuxR family transcriptional regulator  30.77 
 
 		 213 aa  43.5  0.0008  Burkholderia phymatum STM815  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012857  Rpic12D_3718  two component transcriptional regulator, LuxR family  32.48 
 
 		 231 aa  43.1  0.001  Ralstonia pickettii 12D  Bacteria  normal  0.0262455  normal  0.571903 
 
 
-
 
NC_008697  Noca_4896  response regulator receiver  30.56 
 
 		 215 aa  42  0.003  Nocardioides sp. JS614  Bacteria  normal  0.446448  normal  0.220667 
 
 
-
 
NC_009078  BURPS1106A_A3133  LuxR family DNA-binding response regulator  28.57 
 
 		 215 aa  41.6  0.004  Burkholderia pseudomallei 1106a  Bacteria  normal  1  n/a   
 
 
-
 
NC_003296  RSp0338  negative regulator of exopolysaccharide production transcription regulator protein  34.72 
 
 		 236 aa  41.2  0.005  Ralstonia solanacearum GMI1000  Bacteria  normal  0.104039  normal  1 
 
 
-
 
NC_007650  BTH_II2335  LuxR family DNA-binding response regulator  28.57 
 
 		 215 aa  40.4  0.009  Burkholderia thailandensis E264  Bacteria  normal  1  n/a   
 
 
-
 
NC_008322  Shewmr7_1614  response regulator  26.47 
 
 		 214 aa  40  0.01  Shewanella sp. MR-7  Bacteria  unclonable  0.000000746753  normal  0.505035 
 
 
-
 
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