9 homologs were found in PanDaTox collection
for query gene RSc0170 on replicon NC_003295
Organism: Ralstonia solanacearum GMI1000



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_003295  RSc0170  hypothetical protein  100 
 
 
567 aa  1143    Ralstonia solanacearum GMI1000  Bacteria  normal  0.925369  normal  0.490181 
 
 
-
 
NC_007951  Bxe_A3787  putative transmembrane protein  52.92 
 
 
570 aa  548  1e-154  Burkholderia xenovorans LB400  Bacteria  normal  0.513633  normal  0.514979 
 
 
-
 
NC_010681  Bphyt_0895  putative transmembrane protein  53.83 
 
 
571 aa  545  1e-154  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_007298  Daro_1707  hypothetical protein  30.31 
 
 
699 aa  199  9e-50  Dechloromonas aromatica RCB  Bacteria  normal  0.202061  normal 
 
 
-
 
NC_008752  Aave_0061  hypothetical protein  28.27 
 
 
588 aa  165  2.0000000000000002e-39  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_008312  Tery_1674  hypothetical protein  26.51 
 
 
603 aa  63.9  0.000000008  Trichodesmium erythraeum IMS101  Bacteria  normal  0.0284066  normal 
 
 
-
 
NC_008312  Tery_1349  hypothetical protein  23.73 
 
 
580 aa  60.5  0.00000007  Trichodesmium erythraeum IMS101  Bacteria  normal  normal  0.0362113 
 
 
-
 
NC_013730  Slin_2544  hypothetical protein  35.85 
 
 
571 aa  60.5  0.00000009  Spirosoma linguale DSM 74  Bacteria  normal  0.146923  normal  0.0442965 
 
 
-
 
NC_008312  Tery_1341  hypothetical protein  20.11 
 
 
616 aa  55.1  0.000003  Trichodesmium erythraeum IMS101  Bacteria  normal  normal  0.100096 
 
 
-
 
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