11 homologs were found in PanDaTox collection
for query gene RS02588 on replicon NC_003296
Organism: Ralstonia solanacearum GMI1000



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_003296  RS02588  signal peptide protein  100 
 
 
109 aa  213  9.999999999999999e-55  Ralstonia solanacearum GMI1000  Bacteria  normal  0.64703  normal 
 
 
-
 
NC_010678  Rpic_4254  putative signal peptide protein  59.09 
 
 
109 aa  107  8.000000000000001e-23  Ralstonia pickettii 12J  Bacteria  normal  normal  0.319211 
 
 
-
 
NC_012857  Rpic12D_4364  signal peptide protein  59.09 
 
 
109 aa  107  8.000000000000001e-23  Ralstonia pickettii 12D  Bacteria  normal  0.386611  normal 
 
 
-
 
NC_007348  Reut_B5415  putative lipoprotein  50 
 
 
116 aa  57.8  0.00000005  Ralstonia eutropha JMP134  Bacteria  normal  0.0799703  n/a   
 
 
-
 
NC_008390  Bamb_1409  hypothetical protein  50 
 
 
110 aa  50.4  0.000008  Burkholderia ambifaria AMMD  Bacteria  normal  n/a   
 
 
-
 
NC_007974  Rmet_3660  hypothetical protein  46.67 
 
 
122 aa  47  0.00009  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_010551  BamMC406_1449  hypothetical protein  40.68 
 
 
109 aa  45.8  0.0002  Burkholderia ambifaria MC40-6  Bacteria  normal  0.145056  normal 
 
 
-
 
NC_011071  Smal_2327  hypothetical protein  35 
 
 
146 aa  43.9  0.0008  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal 
 
 
-
 
NC_010084  Bmul_1726  hypothetical protein  42.22 
 
 
108 aa  42.4  0.002  Burkholderia multivorans ATCC 17616  Bacteria  normal  hitchhiker  0.00000356622 
 
 
-
 
NC_007951  Bxe_A2792  hypothetical protein  35.94 
 
 
120 aa  41.6  0.004  Burkholderia xenovorans LB400  Bacteria  normal  0.101283  normal  0.544535 
 
 
-
 
NC_010681  Bphyt_1659  hypothetical protein  36.92 
 
 
104 aa  40.8  0.006  Burkholderia phytofirmans PsJN  Bacteria  normal  0.69389  normal  0.537335 
 
 
-
 
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