15 homologs were found in PanDaTox collection
for query gene RPD_1418 on replicon NC_007958
Organism: Rhodopseudomonas palustris BisB5



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007958  RPD_1418  hypothetical protein  100 
 
 
173 aa  348  1e-95  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.803078  normal 
 
 
-
 
NC_011004  Rpal_3181  protein of unknown function UPF0157  74.07 
 
 
175 aa  243  9e-64  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.0196376  n/a   
 
 
-
 
NC_007925  RPC_2737  hypothetical protein  69.75 
 
 
187 aa  210  7e-54  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.809483  normal  0.132345 
 
 
-
 
NC_012793  GWCH70_1602  protein of unknown function UPF0157  44.22 
 
 
165 aa  119  1.9999999999999998e-26  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_009456  VC0395_0906  hypothetical protein  33.75 
 
 
188 aa  92  4e-18  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_4356  protein of unknown function UPF0157  31.65 
 
 
164 aa  52.4  0.000003  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_011662  Tmz1t_1655  protein of unknown function UPF0157  33.33 
 
 
191 aa  49.7  0.00002  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_2849  hypothetical protein  29.25 
 
 
183 aa  47.4  0.00009  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.0276112  n/a   
 
 
-
 
NC_006368  lpp1089  hypothetical protein  30.26 
 
 
601 aa  46.2  0.0002  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_014151  Cfla_0204  protein of unknown function UPF0157  33.1 
 
 
178 aa  45.4  0.0003  Cellulomonas flavigena DSM 20109  Bacteria  normal  normal  0.358408 
 
 
-
 
NC_013174  Jden_0322  protein of unknown function UPF0157  28.77 
 
 
173 aa  44.3  0.001  Jonesia denitrificans DSM 20603  Bacteria  normal  0.169012  normal  0.0199822 
 
 
-
 
NC_012850  Rleg_2990  protein of unknown function UPF0157  30.92 
 
 
171 aa  43.1  0.002  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.377938  normal  0.0790959 
 
 
-
 
NC_011369  Rleg2_2729  protein of unknown function UPF0157  30.29 
 
 
170 aa  42  0.004  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.208995  normal 
 
 
-
 
NC_013203  Apar_0759  protein of unknown function UPF0157  25.49 
 
 
190 aa  41.2  0.007  Atopobium parvulum DSM 20469  Bacteria  normal  normal 
 
 
-
 
NC_011369  Rleg2_4110  protein of unknown function UPF0157  30 
 
 
170 aa  40.8  0.008  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
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