Gene RPD_1418 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_1418 
Symbol 
ID4021895 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp1584183 
End bp1584704 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content64% 
IMG OID637961610 
Producthypothetical protein 
Protein accessionYP_568556 
Protein GI91975897 
COG category[S] Function unknown 
COG ID[COG2320] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.803078 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGATGG CCCATCCCGA TGTGTTCCAC GTCGCCACAG ATCACCAACA GGCTCGTGCG 
GCGGCCGAGC GCTTGTTCGC GGCCGTGCAG CAGCAGCTTC ACGCGCTTCT CCCTGCGACC
GCCGAGGTTC TGCACGTCGG CGCGACGGCC GTCCCGGGAT GTCTCACCAA GGGCGACCTC
GATATTGTCG TGCGGGTGGA GCGCAAGGAT TTCCAAGCCG TCGAAGCCGC GCTTGCCGCC
CGCTTCGCCC GCAATCCTGG CTCGATCGGA ACAGATGAGT TCGCCGCCTT CGAGGACGAG
GACCGCACGC CTCACCTCGG CATCCAACTC ACGGCCAAGG GTGGCGAATG GGACGTCTTC
CACCGCTTCG TCGACGCGCT GCGCGCCGAT CCGGATCTGG TGAAAAGCTA CAATGCTCTC
AAGATGGCGC ATGACGGACA AACCATGGAA CGTTACCGGG CGGCCAAGGA CGCCTTTGTG
GCCGATGCGC TGCTCCACGC TCCAGCCAAA CCAAGTGGTT GA
 
Protein sequence
MTMAHPDVFH VATDHQQARA AAERLFAAVQ QQLHALLPAT AEVLHVGATA VPGCLTKGDL 
DIVVRVERKD FQAVEAALAA RFARNPGSIG TDEFAAFEDE DRTPHLGIQL TAKGGEWDVF
HRFVDALRAD PDLVKSYNAL KMAHDGQTME RYRAAKDAFV ADALLHAPAK PSG