Gene Jden_0322 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_0322 
Symbol 
ID8379514 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp342823 
End bp343344 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content54% 
IMG OID645003057 
Productprotein of unknown function UPF0157 
Protein accessionYP_003160296 
Protein GI256831569 
COG category[S] Function unknown 
COG ID[COG2320] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.169012 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0199822 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAAATG AGTGGTTTGA TAAGCCTGGT GGGGAGCCAG TGGAACTAAA GGAAGCTGAT 
CCACTGTGGC CATTGGTAGC GGCTGAATGG TCTAACCGAA TCCAATCGGC CATCGTTCCC
ACGGTTGCGC GAATAGAACA TGTAGGGTCA ACATCGATCC CTGACCTGAT CGCCAAGCCC
GTACTTGACC TACAAGTATC TGTGCCAGAT ATAAACGATG AATCGGCCTA TCGTCCTGGA
CTTGAATCGT TAGGTCTCGT GCTTCGGCAA CGCGAACCCG ACCACCGATT CTTTCGCCCA
CCAGCCGGTG AACCTCGCGT CGTGCACATA CACGTCTGCG AAGAAGGATC AGCTTGGGAA
CACGACGTGT TGCGTTTCCG CGAAAAGCTT CGAGCCGATC CGAATCTTGC CGCCGAATAC
GCCACGCTTA AGTCCGGTCT CGCTGACCGC TACAGCACTG ACCGGCTCTC CTACAACAAC
GGAAAAGCTC AATTTATCTC GCGCGTCATT GCGGGTGAGT AG
 
Protein sequence
MTNEWFDKPG GEPVELKEAD PLWPLVAAEW SNRIQSAIVP TVARIEHVGS TSIPDLIAKP 
VLDLQVSVPD INDESAYRPG LESLGLVLRQ REPDHRFFRP PAGEPRVVHI HVCEEGSAWE
HDVLRFREKL RADPNLAAEY ATLKSGLADR YSTDRLSYNN GKAQFISRVI AGE