25 homologs were found in PanDaTox collection
for query gene Psyr_4591 on replicon NC_007005
Organism: Pseudomonas syringae pv. syringae B728a



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007005  Psyr_4591  DNA circulation, N-terminal  100 
 
 
470 aa  947    Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.422243  normal 
 
 
-
 
NC_004578  PSPTO_0581  DNA circulation protein, putative  89.32 
 
 
607 aa  442  1e-123  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.519076  n/a   
 
 
-
 
NC_007492  Pfl01_1158  DNA circulation-like  45.73 
 
 
411 aa  410  1e-113  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_3864  phage FluMu DNA circulation protein, putative  36.82 
 
 
420 aa  283  6.000000000000001e-75  Pseudomonas putida KT2440  Bacteria  normal  normal  0.891467 
 
 
-
 
NC_011205  SeD_A2255  tail/DNA circulation protein  27.82 
 
 
446 aa  141  3e-32  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  hitchhiker  0.000334711 
 
 
-
 
NC_011094  SeSA_A4477  tail/DNA circulation protein  27.46 
 
 
446 aa  139  1e-31  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  hitchhiker  0.00305287 
 
 
-
 
NC_011094  SeSA_A2252  tail/DNA circulation protein  27.46 
 
 
446 aa  138  3.0000000000000003e-31  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal  0.257831 
 
 
-
 
NC_009436  Ent638_2588  DNA circulation family protein  45.14 
 
 
438 aa  131  2.0000000000000002e-29  Enterobacter sp. 638  Bacteria  normal  normal  0.0328137 
 
 
-
 
NC_010465  YPK_3117  DNA circulation family protein  27.46 
 
 
468 aa  116  8.999999999999998e-25  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_007948  Bpro_3737  DNA circulation-like  38.93 
 
 
415 aa  107  4e-22  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_009708  YpsIP31758_2737  putative DNA circulation protein  23.47 
 
 
468 aa  97.1  7e-19  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_007951  Bxe_A3051  putative bacteriophage DNA circulation protein, Mu-like  33.11 
 
 
475 aa  95.5  2e-18  Burkholderia xenovorans LB400  Bacteria  normal  0.273853  hitchhiker  0.000025391 
 
 
-
 
NC_010465  YPK_2815  DNA circulation family protein  23.27 
 
 
468 aa  95.1  2e-18  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_010159  YpAngola_A1469  putative DNA circulation protein  23.08 
 
 
468 aa  93.6  7e-18  Yersinia pestis Angola  Bacteria  normal  normal  0.539442 
 
 
-
 
NC_004347  SO_2698  prophage MuSo2, DNA circulation protein, putative  35.71 
 
 
438 aa  89.7  9e-17  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009457  VC0395_A0745  DNA circulation protein  39.23 
 
 
439 aa  87.4  5e-16  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_009457  VC0395_A0692  DNA circulation protein  39.23 
 
 
439 aa  87.4  5e-16  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_009720  Xaut_4486  Mu-like prophage DNA circulation protein-like protein  35.43 
 
 
428 aa  79.7  0.0000000000001  Xanthobacter autotrophicus Py2  Bacteria  normal  0.126188  normal  0.0913206 
 
 
-
 
NC_011769  DvMF_0744  DNA circulation family protein  35.96 
 
 
446 aa  76.6  0.0000000000009  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_009485  BBta_6587  putative Mu-like prophage DNA circulation protein  34.21 
 
 
422 aa  75.9  0.000000000001  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_010465  YPK_0189  DNA circulation family protein  28.12 
 
 
439 aa  72.4  0.00000000001  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_009436  Ent638_1654  DNA circulation family protein  46.97 
 
 
153 aa  72.4  0.00000000002  Enterobacter sp. 638  Bacteria  normal  normal 
 
 
-
 
NC_009800  EcHS_A2088  hypothetical protein  32.97 
 
 
128 aa  57.4  0.0000006  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_010622  Bphy_1874  DNA circulation family protein  32.29 
 
 
490 aa  52.4  0.00002  Burkholderia phymatum STM815  Bacteria  normal  hitchhiker  0.0000000000818097 
 
 
-
 
NC_011894  Mnod_2449  putative Mu-like prophage DNA circulation protein  26.62 
 
 
159 aa  52.4  0.00002  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>