| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_0581 |
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| Symbol | |
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| ID | 1182192 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 637355 |
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| End bp | 639178 |
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| Gene Length | 1824 bp |
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| Protein Length | 607 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637391948 |
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| Product | DNA circulation protein, putative |
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| Protein accession | NP_790428 |
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| Protein GI | 28867809 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4228] Mu-like prophage DNA circulation protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.519076 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTACAT GGCGTGACAG CCTGCTGCCA GCGTCTTTCC GTGGTGTCGG TTTTTTCATT
GAAAAAGCCG TCGTCCCGGT GGGTCGCAAA GGGCAGTTGC ATGAATTTCC ACAGCGCGAC
GAGCCTTACT TCGAGTCGCT GGGCAAGCAG GCGCAGGTTC ATACGCTGAC GGCTTTTATT
GTCGGTCGCG ACTGTTTTGA AAAACGGGAC AACTTGCTTC AGGCGCTGGA GAAGGACGGT
GCGGGTGAGC TGGTGCACCC GTGGCTGGGG CGCATGCAGG TACAGGTCGG GCAGTGCAGT
GTGACGCACA CCCTGATTGA AGGCGGGATG GTCCGGCTGG ACCTGGTGTT TTATCCGGCC
AACCCGCTCA AGTTTCCTGT GTCGACGCTC AATACCCGGC GGCAACTGCT CGGCGCGTCC
GCGAGCCTGC TGGACTCGGC GCTTCGGCGC TATCGCTCGG TGATGGCCGT CGTGGATGCC
GTGCGCATCA ACGTTCAGGC GCTGCGCAGT GCGCTGTCCG GGGTGTTTGC CACTATTCAG
CGGCAGTTTG CGCCGTTCAT GGCGATTTAC TCGGATGTCA CTGCACTGGT GCATTCGCTG
GTCAATGCGC CGCTGACGGT GAGCACGTTG TTCACCACGT TCTTTGCCAG TTTCGACGGC
GACAGTCGCC GATCCAGACG AGCGAATGGC AGCAGCAGTG TCAGCGGCGC CAGCACCACA
ACCGGTTCCG GCAGTTCGGT CGGCGGCGGT TCAGGTGCTG GCTCGGGTGG AAGTTCCGGC
AGTGGTTCCG GCAGCAGCAC CTCCATCAGC CTGGCGTCGA GTTCCGGCAG CAGCGGTGGG
TCTTCCGACC TTGAAACGGT CCCTTACCCG GACGCCCCGT TCCAAGGAGA TCCTTGGCAC
TTCTCGCGCC CCCTAGGCGA TGGTTTCATC GGACAGCTCT CCTCGCGGAC AGCCCTTCGT
GCTATCTCTG CCTACCTTCG CACGTTGGCG GTGGCTGAAG AGTTCTGGGG CATGCCAACG
GATCGGGCTG AAGCTAGTGC TCTATTGGCC TTACCAGTTC ATCCGACGTT GGCCCTGCTC
AGGCCTGAGC GCCCGATTTG GTTCCCCGCT ACAACTGACT TCGATGGCGA TAGAGAGGCT
ATCGAATCAT CTATGCGAGG CTTGGTAGCC CGCGTAAAAA CAGCGCGGCC GGATGACGAA
CTGATCGCTT TCGCTTCTCC AATATTTGTT TCAATGGAGC GGTGTGTGGA GGTTTCACTC
GTCCGGTGGT CACAAGCTGA GGAGAGTAGT ATTGCCGACG CTGACTTGGC CGCACATCTA
GAGGAGTTCT GGGCCGACGG TTGGATGCTT CGTAGTGCAT CTCCTGAACC TTTGAGCACG
ACAACCGTGT TCGCTTCCCC CCCGCTAGAT AGGCTGATGG AGGACCAATG CAAGGCTTGG
CCGCTTGCCG CGCCGCTTGG TATCGACCGT TTGGGGTATC TCCAACACGA CCTATATCCT
GGAAGGCTTT TTCTTCCGAC GCTTCCTAGC ACCGACCAAG CCGAACTTAC TCCTCGCGGG
GGACAGTTGG AGATTAAGGT TGACGAGCAG GTCATCGCGG ACCTCTGTTA TTGGAATGCG
GGTTGGGGAA CTGCGCGCCC CATGCAGTTC AGTGGTAACT GCGGTACAGC ACTTACTTCA
CGAGGTAGGT GCTATCGGGA GGGGGAGGAC GCACTGGAAG GTGCGGTGCG ATCATTCTAT
CTTTGGGAGG TGAAAACACT GCACCGATCC AACACTTTTG AGCCCTTCAA TCAAACTCTA
ACGACGGGAG CGATGTTTGT TTAG
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| Protein sequence | MSTWRDSLLP ASFRGVGFFI EKAVVPVGRK GQLHEFPQRD EPYFESLGKQ AQVHTLTAFI
VGRDCFEKRD NLLQALEKDG AGELVHPWLG RMQVQVGQCS VTHTLIEGGM VRLDLVFYPA
NPLKFPVSTL NTRRQLLGAS ASLLDSALRR YRSVMAVVDA VRINVQALRS ALSGVFATIQ
RQFAPFMAIY SDVTALVHSL VNAPLTVSTL FTTFFASFDG DSRRSRRANG SSSVSGASTT
TGSGSSVGGG SGAGSGGSSG SGSGSSTSIS LASSSGSSGG SSDLETVPYP DAPFQGDPWH
FSRPLGDGFI GQLSSRTALR AISAYLRTLA VAEEFWGMPT DRAEASALLA LPVHPTLALL
RPERPIWFPA TTDFDGDREA IESSMRGLVA RVKTARPDDE LIAFASPIFV SMERCVEVSL
VRWSQAEESS IADADLAAHL EEFWADGWML RSASPEPLST TTVFASPPLD RLMEDQCKAW
PLAAPLGIDR LGYLQHDLYP GRLFLPTLPS TDQAELTPRG GQLEIKVDEQ VIADLCYWNA
GWGTARPMQF SGNCGTALTS RGRCYREGED ALEGAVRSFY LWEVKTLHRS NTFEPFNQTL
TTGAMFV
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