9 homologs were found in PanDaTox collection
for query gene Pput_0911 on replicon NC_009512
Organism: Pseudomonas putida F1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009512  Pput_0911  hypothetical protein  100 
 
 
291 aa  610  1e-173  Pseudomonas putida F1  Bacteria  normal  normal  0.882124 
 
 
-
 
NC_009485  BBta_3700  hypothetical protein  33.47 
 
 
363 aa  127  3e-28  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.130422  normal 
 
 
-
 
NC_007912  Sde_3487  hypothetical protein  30.95 
 
 
364 aa  120  1.9999999999999998e-26  Saccharophagus degradans 2-40  Bacteria  normal  normal  0.0530742 
 
 
-
 
NC_010338  Caul_3925  hypothetical protein  29.58 
 
 
310 aa  101  2e-20  Caulobacter sp. K31  Bacteria  normal  normal  0.111688 
 
 
-
 
NC_012917  PC1_0071  hypothetical protein  23.16 
 
 
343 aa  100  2e-20  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_008786  Veis_4825  hypothetical protein  25.47 
 
 
366 aa  58.2  0.0000002  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.923521  normal  0.409572 
 
 
-
 
NC_008699  Noca_3964  hypothetical protein  24.79 
 
 
322 aa  51.2  0.00002  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_007413  Ava_4621  hypothetical protein  27.33 
 
 
368 aa  49.7  0.00006  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.220381 
 
 
-
 
NC_013169  Ksed_18920  hypothetical protein  28.35 
 
 
299 aa  46.2  0.0006  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.620455  normal 
 
 
-
 
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