10 homologs were found in PanDaTox collection
for query gene Plim_2650 on replicon NC_014148
Organism: Planctomyces limnophilus DSM 3776



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_014148  Plim_2650  replication initiation factor  100 
 
 
429 aa  892    Planctomyces limnophilus DSM 3776  Bacteria  normal  0.624324  n/a   
 
 
-
 
NC_011146  Gbem_3067  replication initiation factor  38.61 
 
 
390 aa  272  7e-72  Geobacter bemidjiensis Bem  Bacteria  normal  0.0900674  n/a   
 
 
-
 
NC_007517  Gmet_2276  replication initiation factor  38.83 
 
 
393 aa  265  1e-69  Geobacter metallireducens GS-15  Bacteria  decreased coverage  0.00843988  hitchhiker  0.00603168 
 
 
-
 
NC_009455  DehaBAV1_0084  hypothetical protein  27.22 
 
 
383 aa  117  5e-25  Dehalococcoides sp. BAV1  Bacteria  normal  n/a   
 
 
-
 
NC_009455  DehaBAV1_1041  hypothetical protein  25.51 
 
 
386 aa  104  3e-21  Dehalococcoides sp. BAV1  Bacteria  normal  n/a   
 
 
-
 
NC_002936  DET1477  hypothetical protein  26.25 
 
 
344 aa  99.4  1e-19  Dehalococcoides ethenogenes 195  Bacteria  normal  0.192207  n/a   
 
 
-
 
NC_009719  Plav_0100  hypothetical protein  27.81 
 
 
368 aa  84  0.000000000000005  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal  0.243385 
 
 
-
 
NC_007298  Daro_1039  hypothetical protein  25.34 
 
 
468 aa  68.9  0.0000000001  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_011891  A2cp1_3699  hypothetical protein  27.23 
 
 
414 aa  63.2  0.000000008  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_014148  Plim_2011  hypothetical protein  25.35 
 
 
431 aa  53.5  0.000006  Planctomyces limnophilus DSM 3776  Bacteria  normal  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>