Gene Plim_2650 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_2650 
Symbol 
ID9139362 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp3432851 
End bp3434140 
Gene Length1290 bp 
Protein Length429 aa 
Translation table11 
GC content51% 
IMG OID 
Productreplication initiation factor 
Protein accessionYP_003630672 
Protein GI296122894 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.624324 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGTGACG AGAGTTTCTC GCGCAAGGAG AACAATTCCT GGTGCGATAT TCCCCAGAAG 
TTTTCTTCTG AAGAACACCC AATAGGCGAT TCTCAACAAA ATCCCATGCA ACGGCATGGG
GGCGAGGCAT TGTCTGTAAC ACGCCTAGCC CCCTTTACAA ATGGGGAGAA GAATCACCTT
CCTGTTCCTC TGATTTGCGG CGTTGATACA CTCGACCTGG GCCTTTACAT CGAGTGGAGT
TCAAACTGGT CGGATCTGAC TCAGATTCTC GATCAAGCCA AGGAGCAGGC CGCAGGAACT
CAAGGTGTTC CGATCTTTGG CGATCATTTC CTCATCCTCC CCAGTGGTAA GCCACCCAGC
TATCGCTGGC ATCTCCAATG GCCGGAGTTT CATCTCTATC TGGGACGCAG TGCTGAACCT
TACAGAAACA CTCCCAATGG TTATGTTTCG ATCAATGCGA AAACGCTCTG GTCGATGGGA
ATCTCCAGTG CGGTCAATCT GATGGTTCGT TGGATTGAGC TTCTGGAAGG AAAAGTGCGA
TCGATCAAAC CGAGCCGGTG TGATCTGGCC GTTGATCTTC AACTCAAAGA CCCTCTGAGT
CTGCCATTTC TCCTGAGTCA TCGAGTCCCG CAGCATGTGC AGCATTCTCA CAATATGACT
GGCGATTCAC TGGAGACGTT TTATCACGGC GCCAAGAAAT CACCGATTCA ATTGAGAATC
TATGACAAGG GCCTGGAAGT TCTCAAAGGG GGTACCAAGC TCTGGTTCTA CGAGCTTTGG
AATGTTGAGC CGGAAACGCA TGTCTGGCGA ATTGAGTATC AGCTACGCCG GGAGATTCTC
AAACAGTTTG GCATTGATCA ACTGGATCAT CTGATTGAGA AAGTCGGGGG ATTATGGCAG
TACCTCACCG AAGACTGGTT CTCTCTGCGG GCACAAGATG ACTGCAACAC GAGCCGCCGC
ACAGTGCTTC CCTGGTGGGA GGTCGTGCAA TCATGTGCCG ATCAATTCGG GTCATTGATG
AATCTGGAGC GAACGCTTGA TACCGCTTCT GCTGACAGCA CCTGGTATGT GAACCACGTC
GCTGGCTGCC TGGTGGGATA TGCCGCAAGA GAACGGTTAC TCACGCTACA AGACGCACTG
GCCTCCATGT CTGATCAAGT GCGTTGGTAT TTCGATCAAC ACGACTTTCA AAGCAAGCTC
GCTGTGAAAT CGATTCAACT GGGTTACCCG GGGAGTTCCG GGGGCACAGA AATCGATACC
TCTACTTCCG GAAAGGAATC CGAATCATGA
 
Protein sequence
MCDESFSRKE NNSWCDIPQK FSSEEHPIGD SQQNPMQRHG GEALSVTRLA PFTNGEKNHL 
PVPLICGVDT LDLGLYIEWS SNWSDLTQIL DQAKEQAAGT QGVPIFGDHF LILPSGKPPS
YRWHLQWPEF HLYLGRSAEP YRNTPNGYVS INAKTLWSMG ISSAVNLMVR WIELLEGKVR
SIKPSRCDLA VDLQLKDPLS LPFLLSHRVP QHVQHSHNMT GDSLETFYHG AKKSPIQLRI
YDKGLEVLKG GTKLWFYELW NVEPETHVWR IEYQLRREIL KQFGIDQLDH LIEKVGGLWQ
YLTEDWFSLR AQDDCNTSRR TVLPWWEVVQ SCADQFGSLM NLERTLDTAS ADSTWYVNHV
AGCLVGYAAR ERLLTLQDAL ASMSDQVRWY FDQHDFQSKL AVKSIQLGYP GSSGGTEIDT
STSGKESES