Gene Plim_2011 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_2011 
Symbol 
ID9138713 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp2609578 
End bp2610873 
Gene Length1296 bp 
Protein Length431 aa 
Translation table11 
GC content49% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003630039 
Protein GI296122261 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATGACG AAACTGAATT TGAGAATGAT TCTCTGACGA TGGCAGCAGG TGCGGCCTCA 
AGTAACACGC ACCTGCAAAC TAGCCAACCT GTTGAATCCA TATCAGGAAT TGTCGCTATC
GATTGGTGGG AAGTTGGAGC CTGTGCCCTT TGGAGCACGA GTTCAAAGTC AGCCTGCGGA
AAGTTTTTTC CGAAGCTGGA GGAACTGAGA GCCGCATCTC AAGACACCAA GCAACCTCAG
TTCATCCAGA TTGGCAATAA CGTCTGGCAA GTGATGGCCA AAGGGCGGGG CGGTGGCAAA
GGAGCCTACT ATCGTTACCA GCTGAGCTGT GAAGGAATTT CTGTCGCCCT GGGTGCCCAA
GGCGGACAGT CACGACTTTT TTCCAATTTT GCTTACACAA TACCTGGCGA GGCATGCCTG
CTTCTGGGTG TTCCTGAATC CGAAAAACGA ATCCAAGATG TTCTGACATA TTTCGGTGGA
ACATTCACCG ATCGATGGAT CCGAAGAATC GATCTGTGCC TCGATACACT GTATCCAGAT
CTCTGCCTGA CCTTCTGCAA ACTCCTTTTA AGTGGATACT ATGTTGGATC AACTCGCGAC
TACGCTCTTT ATCGATCCGC GGGCAACACT TCTGGATTTG GAACCACTTC ATCCAGTGGC
ATTCAGATTC GTGTTTATGA CAAACTCACA GAGTTATCGA AGAAATCCGA AGCGTATCAA
CTCGAGATGT ATGCCAATCG CTGGGGCGGT GAGATTCCCT CCAGTGCTAC GAGGATTGAG
TACCAAATCA GAAAGGAATA CCTCGCCCTA TTCGGCATCA AGACACTGGA CGAAGCCGTC
AAACGACTGC CAGACATCAT TCGCCGAGTG ACTCAGTTTG AACCAAATCC TCACTTTGGA
TTCACAACTT CGGTTCCTGA TCGGGCCAAT AATCATCAAT CACGTGCCAC CATTCACCCT
TTGTGGGCGG CCGTTATCCA CAAATTTCAA CAATTTGCAG GGACTTCCCA AACCCCTCTC
AAGCGAGTCG ACCGAGGAAA TCTCAATAAT CGCAGAGCTC ATCAAATGAT CTCCGGCTTC
CTAACAACTT CAGCAGCCAA AAGCGGCTAC CCAATCAAGA ATCTAAGCGA TGCTCAGAAT
TGGTTGAAGG AACTCTCTGA ACGGAACAAC TTCACCGATA CCGATTGGAA ACTCAAAGGC
GAAATGAAAG CGAAGTCGGA GAATCAATCC ATGGATTCTC ACCGTTACCA GTCAAACTGG
GAAGTCGATC GGGAGGATGT CGATGGACCA CGATAA
 
Protein sequence
MDDETEFEND SLTMAAGAAS SNTHLQTSQP VESISGIVAI DWWEVGACAL WSTSSKSACG 
KFFPKLEELR AASQDTKQPQ FIQIGNNVWQ VMAKGRGGGK GAYYRYQLSC EGISVALGAQ
GGQSRLFSNF AYTIPGEACL LLGVPESEKR IQDVLTYFGG TFTDRWIRRI DLCLDTLYPD
LCLTFCKLLL SGYYVGSTRD YALYRSAGNT SGFGTTSSSG IQIRVYDKLT ELSKKSEAYQ
LEMYANRWGG EIPSSATRIE YQIRKEYLAL FGIKTLDEAV KRLPDIIRRV TQFEPNPHFG
FTTSVPDRAN NHQSRATIHP LWAAVIHKFQ QFAGTSQTPL KRVDRGNLNN RRAHQMISGF
LTTSAAKSGY PIKNLSDAQN WLKELSERNN FTDTDWKLKG EMKAKSENQS MDSHRYQSNW
EVDREDVDGP R