15 homologs were found in PanDaTox collection
for query gene Pecwa_1612 on replicon NC_013421
Organism: Pectobacterium wasabiae WPP163



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013421  Pecwa_1612  hypothetical protein  100 
 
 
269 aa  562  1.0000000000000001e-159  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_003910  CPS_1649  hypothetical protein  29.75 
 
 
274 aa  108  9.000000000000001e-23  Colwellia psychrerythraea 34H  Bacteria  normal  0.432038  n/a   
 
 
-
 
NC_009777  VIBHAR_p08196  hypothetical protein  29.89 
 
 
274 aa  92.4  8e-18  Vibrio harveyi ATCC BAA-1116  Bacteria  hitchhiker  0.00000170796  n/a   
 
 
-
 
NC_007643  Rru_A0261  hypothetical protein  29.29 
 
 
303 aa  92  9e-18  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.205526  n/a   
 
 
-
 
NC_011898  Ccel_0074  hypothetical protein  30.88 
 
 
309 aa  79.3  0.00000000000006  Clostridium cellulolyticum H10  Bacteria  decreased coverage  0.00000070418  n/a   
 
 
-
 
NC_007434  BURPS1710b_0963  hypothetical protein  26.48 
 
 
365 aa  73.9  0.000000000002  Burkholderia pseudomallei 1710b  Bacteria  normal  0.369617  n/a   
 
 
-
 
NC_011205  SeD_A2315  hypothetical protein  25.19 
 
 
296 aa  72.4  0.000000000007  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  0.106853  hitchhiker  0.000000000000558489 
 
 
-
 
NC_013721  HMPREF0424_0566  hypothetical protein  25.26 
 
 
288 aa  68.9  0.00000000008  Gardnerella vaginalis 409-05  Bacteria  n/a    hitchhiker  0.00656687 
 
 
-
 
NC_009483  Gura_0798  hypothetical protein  24.73 
 
 
307 aa  65.1  0.000000001  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_011060  Ppha_2823  hypothetical protein  24.42 
 
 
297 aa  63.9  0.000000003  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_02980  hypothetical protein  21.24 
 
 
330 aa  51.6  0.00001  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_009943  Dole_2563  hypothetical protein  23.9 
 
 
304 aa  47.8  0.0002  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_1885  hypothetical protein  24.58 
 
 
288 aa  46.2  0.0006  Shewanella loihica PV-4  Bacteria  normal  normal  0.911612 
 
 
-
 
NC_013757  Gobs_3495  hypothetical protein  23 
 
 
276 aa  46.2  0.0006  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_010803  Clim_0653  hypothetical protein  27.43 
 
 
285 aa  45.1  0.001  Chlorobium limicola DSM 245  Bacteria  normal  0.395081  n/a   
 
 
-
 
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