Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_p08196 |
Symbol | |
ID | 5552740 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009777 |
Strand | + |
Start bp | 26003 |
End bp | 26827 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 640898073 |
Product | hypothetical protein |
Protein accession | YP_001436063 |
Protein GI | 156936712 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.00000170796 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTATCATT ATACCGACTT AAATGGTTTT CTATCTATAA TACAAAATAA TTCGCTTTGG CTTACGGACG CGAGAGCTAT GAATGATTCA CTAGAAATAA GTTGGTTTGG AAAGTTGTTC GCTAAAGAGT TAGAACGCTC TATTGAAGGT TTACATCTAT CTCTATCTCA AAAAGAGATT TTAGACGATT TCATCAACTC TTCTTTAAAT TCAAACCTAA CCCCCCACAT ATGTTGTTTC TCCAAAGAGG GAGACTTACT TAGTCAATGG CGTGCCTATG CTGATGACGG CTTTGGAGTC TCGATATTCT TCGATGAGTC AGCATTCAAT AAAGTCTCCC TGAGTCAGTT GCCAGAGAGG TTGGTCGATT CTACTTTCTA TTCAGATATA ATTTATAGCC AAGAAGAACA GGAAGTTGCG TCCAAAAATT TGGTAGATAG AACTGTAAAT GCAATTAACA AAATATCAGG CAATACCAGG AATGATGCAT ATAAAACTCT ACCCATAAGA GAGTTTTGGG ATATCAAGGC TAACATTGAG CTTCAGTCCT ACTTTAGTAA AAACCCCGCA TTTTCAGAAG AAAAAGAGCT AAGGTTCATA AAACTAGTAG AATTGGATAA ATTAAAATAC AAAGAAAAAT TAAGATTCCG TGTAACAGGG GGCACTATTG CATCATACTT TGAGCTTGAA TTTTCAAAAC CTTCGATTAA GAGGGTCATT CTAGGCCCAA AATGCAAAGC AGATGGCAAT ACTATACGAT TGTTTTTGGA TGCTAATGGC TTTGAACATG TCGAAGTTTT GAAGTCAAAA GCTAGTTACC GATAG
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Protein sequence | MYHYTDLNGF LSIIQNNSLW LTDARAMNDS LEISWFGKLF AKELERSIEG LHLSLSQKEI LDDFINSSLN SNLTPHICCF SKEGDLLSQW RAYADDGFGV SIFFDESAFN KVSLSQLPER LVDSTFYSDI IYSQEEQEVA SKNLVDRTVN AINKISGNTR NDAYKTLPIR EFWDIKANIE LQSYFSKNPA FSEEKELRFI KLVELDKLKY KEKLRFRVTG GTIASYFELE FSKPSIKRVI LGPKCKADGN TIRLFLDANG FEHVEVLKSK ASYR
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