Gene VIBHAR_p08196 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_p08196 
Symbol 
ID5552740 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009777 
Strand
Start bp26003 
End bp26827 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content36% 
IMG OID640898073 
Producthypothetical protein 
Protein accessionYP_001436063 
Protein GI156936712 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.00000170796 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTATCATT ATACCGACTT AAATGGTTTT CTATCTATAA TACAAAATAA TTCGCTTTGG 
CTTACGGACG CGAGAGCTAT GAATGATTCA CTAGAAATAA GTTGGTTTGG AAAGTTGTTC
GCTAAAGAGT TAGAACGCTC TATTGAAGGT TTACATCTAT CTCTATCTCA AAAAGAGATT
TTAGACGATT TCATCAACTC TTCTTTAAAT TCAAACCTAA CCCCCCACAT ATGTTGTTTC
TCCAAAGAGG GAGACTTACT TAGTCAATGG CGTGCCTATG CTGATGACGG CTTTGGAGTC
TCGATATTCT TCGATGAGTC AGCATTCAAT AAAGTCTCCC TGAGTCAGTT GCCAGAGAGG
TTGGTCGATT CTACTTTCTA TTCAGATATA ATTTATAGCC AAGAAGAACA GGAAGTTGCG
TCCAAAAATT TGGTAGATAG AACTGTAAAT GCAATTAACA AAATATCAGG CAATACCAGG
AATGATGCAT ATAAAACTCT ACCCATAAGA GAGTTTTGGG ATATCAAGGC TAACATTGAG
CTTCAGTCCT ACTTTAGTAA AAACCCCGCA TTTTCAGAAG AAAAAGAGCT AAGGTTCATA
AAACTAGTAG AATTGGATAA ATTAAAATAC AAAGAAAAAT TAAGATTCCG TGTAACAGGG
GGCACTATTG CATCATACTT TGAGCTTGAA TTTTCAAAAC CTTCGATTAA GAGGGTCATT
CTAGGCCCAA AATGCAAAGC AGATGGCAAT ACTATACGAT TGTTTTTGGA TGCTAATGGC
TTTGAACATG TCGAAGTTTT GAAGTCAAAA GCTAGTTACC GATAG
 
Protein sequence
MYHYTDLNGF LSIIQNNSLW LTDARAMNDS LEISWFGKLF AKELERSIEG LHLSLSQKEI 
LDDFINSSLN SNLTPHICCF SKEGDLLSQW RAYADDGFGV SIFFDESAFN KVSLSQLPER
LVDSTFYSDI IYSQEEQEVA SKNLVDRTVN AINKISGNTR NDAYKTLPIR EFWDIKANIE
LQSYFSKNPA FSEEKELRFI KLVELDKLKY KEKLRFRVTG GTIASYFELE FSKPSIKRVI
LGPKCKADGN TIRLFLDANG FEHVEVLKSK ASYR