5 homologs were found in PanDaTox collection
for query gene Patl_3807 on replicon NC_008228
Organism: Pseudoalteromonas atlantica T6c



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008228  Patl_3807  phage integrase  100 
 
 
346 aa  706    Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_1278  phage integrase  24.58 
 
 
677 aa  103  5e-21  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_007614  Nmul_A1702  Phage integrase  24.16 
 
 
660 aa  89  1e-16  Nitrosospira multiformis ATCC 25196  Bacteria  normal  n/a   
 
 
-
 
NC_008696  Tpen_1891  phage integrase family protein  24.68 
 
 
278 aa  46.2  0.0008  Thermofilum pendens Hrk 5  Archaea  normal  n/a   
 
 
-
 
NC_011830  Dhaf_3715  integrase family protein  26.97 
 
 
298 aa  45.8  0.001  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
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