Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dhaf_3715 |
Symbol | |
ID | 7260736 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfitobacterium hafniense DCB-2 |
Kingdom | Bacteria |
Replicon accession | NC_011830 |
Strand | - |
Start bp | 3946904 |
End bp | 3947800 |
Gene Length | 897 bp |
Protein Length | 298 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 643563639 |
Product | integrase family protein |
Protein accession | YP_002460167 |
Protein GI | 219669732 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | [TIGR02224] tyrosine recombinase XerC |
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Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAGCCG ATCATGCCCT CAGCCTATTC GACGGTCACC TAAAAACCCA AAACCGTTCC CAGCATACTC TCATGGCTTA TCATAAGGAC CTCATCCAAT TTTTTGTGTT TGCCGCCCGG GAGCTGGGAG AAGAGCCGGA AAAAGTGACC GTCGATCAAG TGGATATTTA TATCGTGCGC AGTTTCCTCG GTGAAATGAC GGATCGGGGT CTGGAGAGAA AAAGCATGGC TCGCAAACTT TCTGCCTTGA GAGCCTTTTT TAAGTTCCTT TGCCGGGAGG GGATCCTGCA GAAAAACCCC ATTCAGCGCA TAGCCACCCC TAAGCTGGGC AGAAAGCTTC CCCACTTTCT CTCCCTGGAG GAATTGGATC GATTAATTCG CACTCCTGAT TGTGCCACAC TGCTGGGAGC GCGGGACCAG GTGATCCTGG AATTGCTCTA TGGCTCAGGT TTACGGGTCA GCGAGCTGGC GGATCTTAAC CGTCAGGATA TCGATGCGGG AAGTTCTCTC TTGCGGGTTC GCGGCAAAGG AAATAAAGAG AGAATTGTTC CCTTGACCAA CTATGCTCTG GAAGCCGCCC GCCAGTATCT GGAGATGAGA GAGGACAAAC AAGAGGCCTT GCTTTTGAAT TATCAGGGCA CAAGGCTCTC CGTTCGTTCT ATACGGCGAA TTCTCGACGG ATTGGCTTTG GAGGCTGGAT TATCCCAACA CCTTCATCCC CACATGCTTC GCCACTCCTT TGCCACCCAC TTGCTTGATG GCGGAGCCGA TCTCCGCAGT GTTCAGGAGC TTTTAGGGCA TGCCAAGCTC TCCTCTACCC AGATTTACAC TCATTTAACC AAGGAGCGTT TGCGGGAGGT TTATGAACAA AATCATCCCC GTGCTAAGAA AATGTGA
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Protein sequence | MQADHALSLF DGHLKTQNRS QHTLMAYHKD LIQFFVFAAR ELGEEPEKVT VDQVDIYIVR SFLGEMTDRG LERKSMARKL SALRAFFKFL CREGILQKNP IQRIATPKLG RKLPHFLSLE ELDRLIRTPD CATLLGARDQ VILELLYGSG LRVSELADLN RQDIDAGSSL LRVRGKGNKE RIVPLTNYAL EAARQYLEMR EDKQEALLLN YQGTRLSVRS IRRILDGLAL EAGLSQHLHP HMLRHSFATH LLDGGADLRS VQELLGHAKL SSTQIYTHLT KERLREVYEQ NHPRAKKM
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