11 homologs were found in PanDaTox collection
for query gene Patl_1968 on replicon NC_008228
Organism: Pseudoalteromonas atlantica T6c



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_008228  Patl_1968  hypothetical protein  100 
 
 		 361 aa  757    Pseudoalteromonas atlantica T6c  Bacteria  normal  0.0318887  n/a   
 
 
-
 
NC_007912  Sde_2657  hypothetical protein  70.47 
 
 		 368 aa  546  1e-154  Saccharophagus degradans 2-40  Bacteria  hitchhiker  0.000214903  normal  1 
 
 
-
 
NC_008228  Patl_0812  hypothetical protein  55.69 
 
 		 430 aa  378  1e-104  Pseudoalteromonas atlantica T6c  Bacteria  normal  0.612634  n/a   
 
 
-
 
NC_013730  Slin_2414  hypothetical protein  30.81 
 
 		 377 aa  63.9  0.000000004  Spirosoma linguale DSM 74  Bacteria  normal  1  normal  0.881314 
 
 
-
 
NC_013421  Pecwa_3811  glycoside hydrolase family 43  26.09 
 
 		 535 aa  49.3  0.0001  Pectobacterium wasabiae WPP163  Bacteria  normal  1  n/a   
 
 
-
 
NC_009441  Fjoh_4231  hypothetical protein  27.27 
 
 		 368 aa  47.4  0.0004  Flavobacterium johnsoniae UW101  Bacteria  normal  1  n/a   
 
 
-
 
NC_012917  PC1_3622  Xylan 1,4-beta-xylosidase  25.97 
 
 		 540 aa  45.8  0.001  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.573352  n/a   
 
 
-
 
NC_011899  Hore_20580  glycoside hydrolase family 43  41.1 
 
 		 315 aa  45.4  0.002  Halothermothrix orenii H 168  Bacteria  normal  1  n/a   
 
 
-
 
NC_011899  Hore_22440  Glycosyl hydrolase family 32 domain protein  26.12 
 
 		 210 aa  43.9  0.005  Halothermothrix orenii H 168  Bacteria  normal  1  n/a   
 
 
-
 
NC_013037  Dfer_0745  glycoside hydrolase family 43  33.64 
 
 		 327 aa  43.5  0.005  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.465475  normal  1 
 
 
-
 
NC_009441  Fjoh_2027  glycoside hydrolase family protein  29.25 
 
 		 325 aa  42.7  0.01  Flavobacterium johnsoniae UW101  Bacteria  normal  0.808853  n/a   
 
 
-
 
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