Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hore_20580 |
Symbol | |
ID | 7314382 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halothermothrix orenii H 168 |
Kingdom | Bacteria |
Replicon accession | NC_011899 |
Strand | - |
Start bp | 2224333 |
End bp | 2225280 |
Gene Length | 948 bp |
Protein Length | 315 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 643612502 |
Product | glycoside hydrolase family 43 |
Protein accession | YP_002509798 |
Protein GI | 220932890 |
COG category | [R] General function prediction only |
COG ID | [COG3940] Predicted beta-xylosidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 70 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGATA CCTATACAAA TCCAGTTGGT GGGATAACCG GTATTGGTGA TCCCTATGTC TTAAAACATG AATCACGGTA TTATCTTTAC GCTACTTCAG CAATTAACCG GGGCTTTAAG GTCTGGGAAT CACCAAACCT GGTTGACTGG GAATTAAAGG GGTTGGCCCT GGATTCTTAT TATGAAAAAA ATGGCTGGGG AACAGAAGAT TTCTGGGCCC CTGAGGTTAT TTTTTATAAT AATAAATTTT ATATGACATA TAGTGCCAGG GATAATGATG GTCATTTAAA GATAGCTCTT GCTAGTAGCA AAAGTCCTCT GGGCCCTTTT AAAAATATTA AAGCTCCTCT TTTTGACCGT GGCTTATCCT TCATAGACGC CCATATATTT ATAGATCAAG ATGGCACCCC GTACATTTAT TACGTCAAGG ATTGTTCTGA AAATATTATC AATGGTATTC ATATAAGTCA AATTTATGTA CAGGAAATGA GCCAGGACCT TCTCGAATTA AAAGGTGACC CGGTTTTAGC AATTCAACCA AGTCAGGACT GGGAGGGGAT AAATGATGCC TGGCAGTGGA ATGAAGGCCC CTTTGTCATT AAACATGAAG GTAAGTACTA TATGATGTAT TCAGCTAATT GTTACGCATC CCCGGATTAT TCGATTGGTT ATGCTGTGGC AGAAACCCCC TTGGGTCCCT GGATAAAATA TAGTGGTAAC CCCATATTAT CGAAAAGGAT GGACAAAGGC ATTTCAGGGC CAGGCCATAA CAGCGTAACC GTATCACCAG ACGGCAGTGA ATTATTTGTT GTATATCACA CCCATACCTA TCCCGATTCA CCGGGTGGGG ATAGGACGGT TAACATTGAC AGATTATATT TTGAAGATGG AATATTAAAA GTAAAAGGTC CAACAAGGTC ACCACAACCA GGACCGCGGA GTAATTAA
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Protein sequence | MKDTYTNPVG GITGIGDPYV LKHESRYYLY ATSAINRGFK VWESPNLVDW ELKGLALDSY YEKNGWGTED FWAPEVIFYN NKFYMTYSAR DNDGHLKIAL ASSKSPLGPF KNIKAPLFDR GLSFIDAHIF IDQDGTPYIY YVKDCSENII NGIHISQIYV QEMSQDLLEL KGDPVLAIQP SQDWEGINDA WQWNEGPFVI KHEGKYYMMY SANCYASPDY SIGYAVAETP LGPWIKYSGN PILSKRMDKG ISGPGHNSVT VSPDGSELFV VYHTHTYPDS PGGDRTVNID RLYFEDGILK VKGPTRSPQP GPRSN
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