19 homologs were found in PanDaTox collection
for query gene Patl_0692 on replicon NC_008228
Organism: Pseudoalteromonas atlantica T6c



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_008228  Patl_0692  phage transcriptional activator, Ogr/delta  100 
 
 		 81 aa  167  4e-41  Pseudoalteromonas atlantica T6c  Bacteria  normal  1  n/a   
 
 
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NC_008322  Shewmr7_0718  phage transcriptional activator, Ogr/delta  53.25 
 
 		 82 aa  90.5  6e-18  Shewanella sp. MR-7  Bacteria  normal  1  normal  0.0220217 
 
 
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NC_009656  PSPA7_0358  phage transcriptional activator Ogr/delta  48.1 
 
 		 90 aa  77  0.00000000000008  Pseudomonas aeruginosa PA7  Bacteria  normal  1  n/a   
 
 
-
 
NC_011080  SNSL254_A2939  zinc-finger protein  40 
 
 		 89 aa  75.1  0.0000000000003  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  1  decreased coverage  6.930430000000001e-29 
 
 
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NC_009052  Sbal_1278  phage transcriptional activator, Ogr/delta  45.45 
 
 		 82 aa  74.7  0.0000000000004  Shewanella baltica OS155  Bacteria  normal  1  n/a   
 
 
-
 
NC_009784  VIBHAR_05018  hypothetical protein  44.44 
 
 		 83 aa  70.1  0.000000000009  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_010465  YPK_0895  transcriptional activator Ogr/delta  35 
 
 		 88 aa  68.6  0.00000000003  Yersinia pseudotuberculosis YPIII  Bacteria  normal  0.646461  n/a   
 
 
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NC_011149  SeAg_B2802  zinc-finger protein  35 
 
 		 89 aa  67  0.00000000008  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  1  n/a   
 
 
-
 
NC_008751  Dvul_1475  phage transcriptional activator, Ogr/delta  43.21 
 
 		 79 aa  63.5  0.0000000009  Desulfovibrio vulgaris DP4  Bacteria  normal  0.0527212  normal  1 
 
 
-
 
NC_011312  VSAL_I1024  phage zinc-binding transcriptional activator  42.11 
 
 		 154 aa  58.9  0.00000003  Aliivibrio salmonicida LFI1238  Bacteria  normal  1  n/a   
 
 
-
 
NC_009656  PSPA7_0359  zinc-finger protein  38.36 
 
 		 86 aa  55.8  0.0000002  Pseudomonas aeruginosa PA7  Bacteria  normal  1  n/a   
 
 
-
 
NC_008751  Dvul_2769  phage transcriptional activator, Ogr/delta  50.94 
 
 		 80 aa  55.5  0.0000003  Desulfovibrio vulgaris DP4  Bacteria  normal  0.278918  normal  0.680282 
 
 
-
 
NC_011883  Ddes_0237  transcriptional activator Ogr/delta  45.28 
 
 		 80 aa  49.3  0.00002  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  hitchhiker  0.000439463  n/a   
 
 
-
 
NC_007347  Reut_A2195  Phage transcriptional activator, Ogr/Delta  40 
 
 		 97 aa  47.4  0.00007  Ralstonia eutropha JMP134  Bacteria  normal  1  n/a   
 
 
-
 
NC_012856  Rpic12D_3117  transcriptional activator Ogr/delta  44.93 
 
 		 88 aa  45.4  0.0002  Ralstonia pickettii 12D  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010508  Bcenmc03_0173  transcriptional activator Ogr/delta  34.62 
 
 		 82 aa  45.1  0.0003  Burkholderia cenocepacia MC0-3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_003295  RSc1904  putative transcriptional activator transcription regulator protein  34.62 
 
 		 82 aa  44.3  0.0005  Ralstonia solanacearum GMI1000  Bacteria  decreased coverage  0.00444501  normal  1 
 
 
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NC_010086  Bmul_4868  transcriptional activator Ogr/delta  35.9 
 
 		 82 aa  42.7  0.002  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.547602  normal  0.181017 
 
 
-
 
NC_003295  RSc0964  putative bacteriophage transcriptional activator-related transcription regulator protein  39.68 
 
 		 73 aa  42  0.003  Ralstonia solanacearum GMI1000  Bacteria  normal  0.809217  normal  1 
 
 
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