Gene RSc1904 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc1904 
Symbol 
ID1220744 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp2089949 
End bp2090197 
Gene Length249 bp 
Protein Length82 aa 
Translation table11 
GC content64% 
IMG OID637238298 
Productputative transcriptional activator transcription regulator protein 
Protein accessionNP_520025 
Protein GI17546623 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00444501 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATCA AATGCCCGCA CTGCGGTTCG CGCATGCACA TCCGCAGCAG CCGTGAGATG 
ACTCTGTTGT CTCGTGAGCT GTACGTGCAG TGCCCCAACG TGGAATGCGC CTACACCTGC
GCCGCGATCC TGTCCGCCGT GCGCACCATC GCGCCGAGCA TGCAGCCGAA CCCCAAGGCC
TATCTCCCTG TCGGGCGCGC CCGCTTGCTG CCCGAAAACA CGCGCCAGCT CGACCTGCTG
CCCGGCTAA
 
Protein sequence
MKIKCPHCGS RMHIRSSREM TLLSRELYVQ CPNVECAYTC AAILSAVRTI APSMQPNPKA 
YLPVGRARLL PENTRQLDLL PG