Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc1904 |
Symbol | |
ID | 1220744 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 2089949 |
End bp | 2090197 |
Gene Length | 249 bp |
Protein Length | 82 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637238298 |
Product | putative transcriptional activator transcription regulator protein |
Protein accession | NP_520025 |
Protein GI | 17546623 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00444501 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAATCA AATGCCCGCA CTGCGGTTCG CGCATGCACA TCCGCAGCAG CCGTGAGATG ACTCTGTTGT CTCGTGAGCT GTACGTGCAG TGCCCCAACG TGGAATGCGC CTACACCTGC GCCGCGATCC TGTCCGCCGT GCGCACCATC GCGCCGAGCA TGCAGCCGAA CCCCAAGGCC TATCTCCCTG TCGGGCGCGC CCGCTTGCTG CCCGAAAACA CGCGCCAGCT CGACCTGCTG CCCGGCTAA
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Protein sequence | MKIKCPHCGS RMHIRSSREM TLLSRELYVQ CPNVECAYTC AAILSAVRTI APSMQPNPKA YLPVGRARLL PENTRQLDLL PG
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