7 homologs were found in PanDaTox collection
for query gene PICST_66679 on replicon NC_009068
Organism: Scheffersomyces stipitis CBS 6054



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009068  PICST_66679  zf-C2H2 Zinc finger, C2H2 type  100 
 
 
664 aa  1382    Scheffersomyces stipitis CBS 6054  Eukaryota  normal  0.124089  normal 
 
 
-
 
NC_009068  PICST_66620  zinc finger protein involved in pre-tRNA splicing  58.93 
 
 
644 aa  152  2e-35  Scheffersomyces stipitis CBS 6054  Eukaryota  normal  0.859513  normal 
 
 
-
 
NC_009042  PICST_66824  tRNA splicing, uptake of branched- chain amino acids  38.02 
 
 
363 aa  87.4  8e-16  Scheffersomyces stipitis CBS 6054  Eukaryota  normal  0.446888  normal  0.123959 
 
 
-
 
NC_009043  PICST_30535  SWI5-like zinc finger protein  32.76 
 
 
520 aa  57  0.000001  Scheffersomyces stipitis CBS 6054  Eukaryota  normal  0.688222  normal 
 
 
-
 
NC_009045  PICST_31924  predicted protein  32.11 
 
 
874 aa  46.6  0.001  Scheffersomyces stipitis CBS 6054  Eukaryota  normal  normal 
 
 
-
 
BN001307  ANIA_09025  Putative transcription factor with C2H2 and Zn(2)-Cys(6) DNA binding domain (Eurofung)  32.86 
 
 
891 aa  45.8  0.002  Aspergillus nidulans FGSC A4  Eukaryota  normal  normal 
 
 
-
 
BN001304  ANIA_10910  Putative transcription factor with C2H2 and Zn(2)-Cys(6) DNA binding domain (Eurofung)  31.88 
 
 
913 aa  44.7  0.006  Aspergillus nidulans FGSC A4  Eukaryota  normal  0.401356  normal  0.142996 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>