| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_30535 |
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| Symbol | SWI5 |
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| ID | 4837852 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009043 |
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| Strand | + |
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| Start bp | 311824 |
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| End bp | 313386 |
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| Gene Length | 1563 bp |
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| Protein Length | 520 aa |
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| Translation table | 12 |
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| GC content | 42% |
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| IMG OID | 640389167 |
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| Product | SWI5-like zinc finger protein |
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| Protein accession | XP_001383341 |
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| Protein GI | 150864503 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3064] Membrane protein involved in colicin uptake |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.688222 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAAGTT CTAGCCAAAA TACAGAAACA ACTGGAAAGG ATCAACAGAA AATCCTGAAT
CTCTCAGATC CACCAACAGT AGGCGGAAGC TCAAGTACGG AATCTGTGGA ACGAGCTACC
AAGTTGGCCG AAGAATATGA GACAGGCAAT GATGACAATA TTAGCGGAGT TTCTCAGGAG
TTTGTAGCGC ATGCCAGTGA GACTGGTCAG CTTCAAAGTC TAGAAAACGA ACAAAGTCAT
TCTATCCAAG AAACTCCAGT AGAGCCGCAG CTCCAACAGC AACTAAAATC TAGCAAAAAC
CGACAGAAAC AAACAAATGA ACAACGTCAT GAACATAATG AGCAACATCG CCAACATCAG
CAACAGATTT CACAACAGCA ACAGATTTCA CAACAGCAAC AGATTTCACA ACAGCAACAG
CTTTCACAAC AGCAACAGCT TTCACAGCAA CAACAACAGC AACAGCTTTC ACAGCAACAA
CAACAGCAAC AGCAACAGCA ACAACAACAA CAACAGCAAC AGCATCATCA ACAACAACAT
ATACAACAGC AACAGCTTCC ACAACAGCTC AATAGGAATG ATGTTTCTTC ATTCATTAAT
ATACCCAGCT ACTTGTACCC CAATGCCAAT GTTTCGTTGG GCTACACTAA TAACAGCAAT
AACAGCAGCA ATTCAGTATC GTCTAATAGT AACAACTACT ATGTGACATC GAGATCAAAC
TCAATAGATC CGCACAATTT TCAGAATGGA AATTCCATTT CTATTGCTTC TGCTGCTACA
AATGCTGCTG AGCAAGAGGC GCAATCGTTC CAGTTCAGAC CGGGAAGACC CAAAAAGAAC
GACGAAATTG ACATTAAGAA ATTCAACTCC AAAACTGTAG CTAACACGTC GCATACAAGA
CCCTTTGCCT GTACTTTCAC AGGGTGTTCT TGGTCTTTTG CCAGAATGTC TGATTTGAGA
AGACATACCA AATCACATTC CGAGCCATTA TTCCATTGCC CGTATTGGCG TAATGATCCT
ACTTGCCATA GAAATGGAGG TGCTTTCAAT AGGCTAGATG TATTGAAAAG ACATCTCCGT
CTTGTTCATT ACGTTAAGGA CAAGAAGCAG TTTACCCAGG ATTCATCAAG AGACGATCCA
GGCTGGTGTA GAGCCTGCCA GCTTATGTTT CCCAATTCCA GGATATTCGT TGAACATTGC
TTGGAGTGCT CGCAACAGCT AGTTCCAACA GAGTGGAAGA GTAGCTCAGG AAGCAGCAGC
ACTTCGAGCT ATTCTAGACA AAAGAATCCT GCTGTATTCC AACCTAATCC CTTTATTCCC
TTGCCACTTC CTCAACAACA GCAAAATCAA CAACAACATC AGCAGCCTGA TTACACTGAC
AACTCACAAG CTAATCACTT GTACGAGCTC TCAAGACTAA GCACAGAAGA AAAAGTAGTG
GCTGAAGCTT ACTTCTTGAA TGCAGACAGC GGTCATGATA ACATCGACGA GGAAACGGGC
AAAAGAGTAA TTGGATACCC GTCTATTCAA GACAAAAAGA GACTTAAATC TGATGGTATA
TAG
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| Protein sequence | MESSSQNTET TGKDQQKISN LSDPPTVGGS SSTESVERAT KLAEEYETGN DDNISGVSQE
FVAHASETGQ LQSLENEQSH SIQETPVEPQ LQQQLKSSKN RQKQTNEQRH EHNEQHRQHQ
QQISQQQQIS QQQQISQQQQ LSQQQQLSQQ QQQQQLSQQQ QQQQQQQQQQ QQQQHHQQQH
IQQQQLPQQL NRNDVSSFIN IPSYLYPNAN VSLGYTNNSN NSSNSVSSNS NNYYVTSRSN
SIDPHNFQNG NSISIASAAT NAAEQEAQSF QFRPGRPKKN DEIDIKKFNS KTVANTSHTR
PFACTFTGCS WSFARMSDLR RHTKSHSEPL FHCPYWRNDP TCHRNGGAFN RLDVLKRHLR
LVHYVKDKKQ FTQDSSRDDP GWCRACQLMF PNSRIFVEHC LECSQQLVPT EWKSSSGSSS
TSSYSRQKNP AVFQPNPFIP LPLPQQQQNQ QQHQQPDYTD NSQANHLYEL SRLSTEEKVV
AEAYFLNADS GHDNIDEETG KRVIGYPSIQ DKKRLKSDGI
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