Gene PICST_31924 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_31924 
Symbol 
ID4839474 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009045 
Strand
Start bp234010 
End bp236634 
Gene Length2625 bp 
Protein Length874 aa 
Translation table12 
GC content46% 
IMG OID640390789 
Productpredicted protein 
Protein accessionXP_001384701 
Protein GI150865470 
COG category 
COG ID 
TIGRFAM ID[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCCGAG CTGGAGCAAG CATGACCAGC CACGGTGGAA CGAACGACAG GTCCTCGACC 
TCCCACGGCG ATGCGGCTCA CACTCCCATG CCTGGCTACA TCCAGCCTTC GTTGTTCGGT
GATGGTGACA TCACCGACAT TAACATCATG ACCAGTGCCA GCAATCCGGA TATCAACAGG
GGACTTCTCC ACAGTGCAAA CAACAACCAC ACCAACACCA GTAACACCAA TAGCGCCCTC
AACAGCAATA TTAGCCCCAA TAGCAATTCT CTCCAGGGAG ATTCGCACAC CCTCGCTAAT
CTCAGTAACC TCAGCAATTT CAGCAATCTC AATAATCTCA GCAACCTCAA TACTCCGGAT
AATTCCACCA CTCCCAACAA CCTCAACTTC AACAATAACT CTTCTGGAAA CCAATACAGC
CAGATGGACG ATTTTGGCTT TGATCTCAAA AACGACCAGT ACGATTACTT CTCGCAGGTC
TCGCTACTGG CACCGTCATC CCGTATAGAC CATGTCTATG GGTTGGATTT CGGAGACTTC
GAGAAATCTC AGCAAAAGCC GCAAGGCAAT CGACAACAAC CACAAGGCCA ACAAACTCTA
CACCAGCCAC TACCACTACC ACTACCGCAA TATGGACAGA ATTTACAAAG TCAATTACAG
AGTCTGAATC AAGTACAAAA TCAATTAAAC AGCCCTGAAC AAAGAGTAGA ACAAGAATTT
CAGAACTATC ATCCCCGTTT CAGATTGAAC CAACAACACT CTCTTTCTCA AGAAGTAGTG
GAGTATCCAA ACGCAGAAGG GTATCAGCCG AAACGTAAAC ACAGTAATGA AAACGATTCA
TCTGTTTCTG ACACAGGGGC GGGACCTGGT TCTGGCTCCA TGACACAGTT GCCATATCCA
CCAAAACCAC CTACCATACG GCAGAACTCG CTTCCATTAT CCCAGAAGGC TATGAACCAC
AACCACAAGA AGAACCACGG AGCTAATGGG CTCAGCTTCT TTGGTTATAG TAGCAATCCA
CAAATCTATG GAAATGAGAA TCCACCGAAT TCCGGAAATT CGCAGAATGC TCAAATTCCC
CAAAATCTCC AAAACCAACA AAAGCAAAAT CTCCCAAACC AATACAATTC TTCTTCTTAC
AACGATATAG ACTTGAATAC AAGTCAGAAA TCCGATGCCA CTGTTACACT TGGCTCACCT
TCTGAGGCTA AAAAGAGAAC AACGCCCAAA CCAAGAGGCA GACCCAGGAA GAATAGAAAT
CCCGGGTTTT TCTTGCCATT AGATAACCTC AACACAAAAA ATCAGCTTGC AAAGGTAGCC
TCTAATTCAA TTTCGTCTTC TCATTCTGAC ACAGCAGCAT ATAACTGGAA CCGGTCTGAA
CGAGTTAACA ATAGTGGCAC AAGAAACTTC AGTGCTAATA TCCCCTTGTT CAAAGATGAT
GGCCAACACA CTCCCAATCC TGAGTTGCGG CTTTTCGAAG CTGATTTAGG ACTTCAGGAC
GACAGCTTGC AACGATTCGC ACCTTCCCAT TCCAATATCA CTCCATCCAT GAATCCTCCT
CTCAATGTAA ATGGCTACTT TGAGTTGGAG AACAGAAATA TTAATAGTAA CAGCAGCAAC
AGCAACAGCC AGTTTGATAC CAGCAGTCTT CTCACTCATT TCATTTCTCC CCACATTAAT
TACAACGAAC ACACCTTCAA CAACTTCAAC AAGGAGTTTG AGGACTATTT GTCAGAATCA
GGTGCGGACT CAAATCTTGT GCAACAGCGT CCGGTTTCGG GTCAATATCA GCTTATAAAT
AAGGAGCAGA TCAGTATGAG CCGAGGAGTT CCTTTGGAAA CTGATCCTGA TGATGTGGGT
TTTGGTGCCG ACTTGGGCGG GTTCAACTTT GATGTTAACC CTCGAAACGA GTTGCTTGAT
CCGGAAAGTC TTCCAAAGCC AACTGTTTAC GACAACAATG AGCTCGTGGC TACCCTGGCA
AGCTCGATGT TGAATCCTAC TCCGATCTAC GACGACAATG ATGCTCTTTC TGTAAACCAG
CATGGAGCTA CAAGTCTCAG CCAGAGTCTG GCCAATGGGT CAGATTTTGA ACTGTCGGAA
TCAGACAGGG AGTCTAAACC ATCGGGTCAT CTAGACGTTC CACGACCAGT AATTGTTCGT
TCCATATCCA ATCATAGTGG CAATAGCAAT TCCAATTCCA ACTCGCTGCC TCCGCAGGAG
TTCAGACACG ACGACAACGA TATATTGCTT CAGAAGCCCA AGAAGAAGCG GTTGCCCAAA
GGTGCCGTTT GCTCCATATG CGACAAGTAC ATAAGTCGAG ACTTGACTAG ACACATGCGG
ATCCACAATG AAGTGGGCCG GTTCCAATGC GTATATCCGA AGTATATGTG CAACCACAAG
ACTCAGTACT TCAACCGGCC CTATGACTAC AAGAAACATC TTCTCCATAT GCATTTCCGC
TTCGACGACC CCAAAGGAAA AACAGCCAAC ACCTTGACAG ATAAGCTACC ATTAGAAGGT
ATCTGTATTG CGTGCGGTGC TCGTTTTGTA GCGAATGACT GGTTGGAAAC TCATGTGTTG
ACGAATTCTG CCACCAAGTG CCCTTCGCTC GAGAATCGGG AGTGA
 
Protein sequence
MGRAGASMTS HGGTNDRSST SHGDAAHTPM PGYIQPSLFG DGDITDINIM TSASNPDINR 
GLLHSANNNH TNTSNTNSAL NSNISPNSNS LQGDSHTLAN LSNLSNFSNL NNLSNLNTPD
NSTTPNNLNF NNNSSGNQYS QMDDFGFDLK NDQYDYFSQV SLSAPSSRID HVYGLDFGDF
EKSQQKPQGN RQQPQGQQTL HQPLPLPLPQ YGQNLQSQLQ SSNQVQNQLN SPEQRVEQEF
QNYHPRFRLN QQHSLSQEVV EYPNAEGYQP KRKHSNENDS SVSDTGAGPG SGSMTQLPYP
PKPPTIRQNS LPLSQKAMNH NHKKNHGANG LSFFGYSSNP QIYGNENPPN SGNSQNAQIP
QNLQNQQKQN LPNQYNSSSY NDIDLNTSQK SDATVTLGSP SEAKKRTTPK PRGRPRKNRN
PGFFLPLDNL NTKNQLAKVA SNSISSSHSD TAAYNWNRSE RVNNSGTRNF SANIPLFKDD
GQHTPNPELR LFEADLGLQD DSLQRFAPSH SNITPSMNPP LNVNGYFELE NRNINSNSSN
SNSQFDTSSL LTHFISPHIN YNEHTFNNFN KEFEDYLSES GADSNLVQQR PVSGQYQLIN
KEQISMSRGV PLETDPDDVG FGADLGGFNF DVNPRNELLD PESLPKPTVY DNNELVATSA
SSMLNPTPIY DDNDALSVNQ HGATSLSQSS ANGSDFESSE SDRESKPSGH LDVPRPVIVR
SISNHSGNSN SNSNSSPPQE FRHDDNDILL QKPKKKRLPK GAVCSICDKY ISRDLTRHMR
IHNEVGRFQC VYPKYMCNHK TQYFNRPYDY KKHLLHMHFR FDDPKGKTAN TLTDKLPLEG
ICIACGARFV ANDWLETHVL TNSATKCPSL ENRE