10 homologs were found in PanDaTox collection
for query gene PHATRDRAFT_47872 on replicon NC_011683
Organism: Phaeodactylum tricornutum CCAP 1055/1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011683  PHATRDRAFT_47872  predicted protein  100 
 
 
340 aa  703    Phaeodactylum tricornutum CCAP 1055/1  Eukaryota  normal  0.147983  n/a   
 
 
-
 
NC_011683  PHATRDRAFT_52304  predicted protein  51.81 
 
 
165 aa  188  1e-46  Phaeodactylum tricornutum CCAP 1055/1  Eukaryota  normal  0.0280012  n/a   
 
 
-
 
NC_011677  PHATRDRAFT_54558  TRD3  31.4 
 
 
288 aa  92.8  7e-18  Phaeodactylum tricornutum CCAP 1055/1  Eukaryota  decreased coverage  0.000340387  n/a   
 
 
-
 
NC_011684  PHATRDRAFT_48054  frustulin 2  30.11 
 
 
482 aa  87  4e-16  Phaeodactylum tricornutum CCAP 1055/1  Eukaryota  normal  n/a   
 
 
-
 
NC_011684  PHATRDRAFT_48049  TRD6  29.89 
 
 
246 aa  80.9  0.00000000000003  Phaeodactylum tricornutum CCAP 1055/1  Eukaryota  decreased coverage  0.0045367  n/a   
 
 
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NC_011684  PHATRDRAFT_38413  TRD2  27.01 
 
 
260 aa  70.5  0.00000000005  Phaeodactylum tricornutum CCAP 1055/1  Eukaryota  normal  0.0515629  n/a   
 
 
-
 
NC_011684  PHATRDRAFT_54863  TRD1  25.41 
 
 
230 aa  66.6  0.0000000005  Phaeodactylum tricornutum CCAP 1055/1  Eukaryota  normal  0.898289  n/a   
 
 
-
 
NC_011691  PHATRDRAFT_49571  predicted protein  41.51 
 
 
1000 aa  45.8  0.001  Phaeodactylum tricornutum CCAP 1055/1  Eukaryota  normal  0.822968  n/a   
 
 
-
 
NC_011686  PHATRDRAFT_48565  predicted protein  40 
 
 
648 aa  44.3  0.003  Phaeodactylum tricornutum CCAP 1055/1  Eukaryota  normal  0.767614  n/a   
 
 
-
 
NC_011689  PHATRDRAFT_49133  predicted protein  50.79 
 
 
590 aa  43.5  0.005  Phaeodactylum tricornutum CCAP 1055/1  Eukaryota  normal  n/a   
 
 
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