7 homologs were found in PanDaTox collection
for query gene PHATRDRAFT_52304 on replicon NC_011683
Organism: Phaeodactylum tricornutum CCAP 1055/1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011683  PHATRDRAFT_52304  predicted protein  100 
 
 
165 aa  345  2e-94  Phaeodactylum tricornutum CCAP 1055/1  Eukaryota  normal  0.0280012  n/a   
 
 
-
 
NC_011683  PHATRDRAFT_47872  predicted protein  51.81 
 
 
340 aa  188  2e-47  Phaeodactylum tricornutum CCAP 1055/1  Eukaryota  normal  0.147983  n/a   
 
 
-
 
NC_011677  PHATRDRAFT_54558  TRD3  32.12 
 
 
288 aa  73.2  0.000000000002  Phaeodactylum tricornutum CCAP 1055/1  Eukaryota  decreased coverage  0.000340387  n/a   
 
 
-
 
NC_011684  PHATRDRAFT_48049  TRD6  31.33 
 
 
246 aa  72.4  0.000000000002  Phaeodactylum tricornutum CCAP 1055/1  Eukaryota  decreased coverage  0.0045367  n/a   
 
 
-
 
NC_011684  PHATRDRAFT_48054  frustulin 2  30.3 
 
 
482 aa  66.6  0.0000000001  Phaeodactylum tricornutum CCAP 1055/1  Eukaryota  normal  n/a   
 
 
-
 
NC_011684  PHATRDRAFT_54863  TRD1  27.38 
 
 
230 aa  62  0.000000004  Phaeodactylum tricornutum CCAP 1055/1  Eukaryota  normal  0.898289  n/a   
 
 
-
 
NC_011684  PHATRDRAFT_38413  TRD2  25.3 
 
 
260 aa  57.4  0.00000008  Phaeodactylum tricornutum CCAP 1055/1  Eukaryota  normal  0.0515629  n/a   
 
 
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