Gene PHATRDRAFT_48565 details

Gene Information

• Locus tag: PHATRDRAFT_48565
• ID: 7194731
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011686
• Strand: +
• Start bp: 225749
• End bp: 227771
• Gene Length: 2023 bp
• Protein Length: 648 aa
• GC content: 49%
• Product: predicted protein
• Protein accession: XP_002183052
• Protein GI: 219125575

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.767614
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTTGTGA CTCTGAAATG TACTCCGAAC ATTCCAATAA TCGCTAAATA TTTGGCGACC 
GTTCCCGGGA TAAAAAGGAC CACGAAAAAA ACTCTCTGCT ACCTCGGCCG ACTCATCAAA 
ATTCTCGTGG TGGCTTTGGA CAAAGATACA ATGAGATTTG CTTCGGCACT GGCATTACTA 
ACGGTGTCGT CGCTCTACCA AAGACTGGCG GTACGCCGAG GAGAATTTAC GGCTGGCGCT 
TTGGAGCAGC CGGGACGGAG GCGGTCTCAA AGAGTCGGAG CAGCTCACCT TAAACTGGAA 
CACTTCAGCG TGAATACCAT ATCACTTTCA TCAAGCGCGG CACTCGATGA GAAAGAATCG 
ATCGGGTATG AGGAGAATGT TCCATCTTCA ATAATCAACG CCCTAGGGGA GTTCGACCCT 
GGCGGTGGTT CCACTGATGT CCCGTCAGCC GTTCCCTCGA AAGTTTCCTC AGACTCACCT 
TCTGATACTC CAAGTGATAC TCCGCAGAGG ATCATACCCA CCTTTGCGTC AAGTAGTTAC 
CCTTCATTGG TTCCCACCAT GTCAACGTCG GATGTCCCGT CGTCGCTTCC GTCTGATGTT 
CCGTCAACAG TACCATCGGA TGTCCCGTCG TCGATTCCGT CGGATGTGCC GCCCACCACA 
CCATCGGATA TTCCTTCTTC AGTCCCCTCC GACGTGCCGT CTACCATACC GTCGGATGTC 
CCTTCGCTTT TTCCGTCTGA TGTACCGTCC ACTATACAAT CGGATTTTCC TTCTTCAGTC 
CCCTCGGACT TGCCTTCCAC CATACCGTCG GATGTCCATT CGTCGATTCC GTCTAGTGTT 
TTGTACTCTA TACTATCAGA TGTTCCTAAT TCTCTCTCAT CCGAAGTACC TTCAGAACTT 
CCATCTTATA TGCTAGCAAA CGTACCTTCA TTCAAGCCAT CGAATGTTCC GTCATTTTCA 
AGTATACCTT CAGCTATCCC GACAACAACC AGTGAAATTT TAACTTTGGC AATGTCCAAT 
CTTCCGTCAA GCCTTCCCTC CGGCATGATG TCTGTACCAT CTGATCTTCC TTCAATTACA 
CCGTCAAATG CGGTGTTGGT AACATCGAAA AGCCCATCAA AAATGCCATC AAATGCAACA 
TCAACGCCAC CCTCCCAAAA TCCCAGCAGA ACGCCAAATG GCTATCCCTC ATTCCGTCCA 
GATCCTTGGC CCACACAACT CCCGATTTCA AAAATGCCCA CAGCATCACC TTTATTTGCA 
CCCACTTTTA CCCAGAATGA AGGCACTTGC GATGGGGATG GCTATACTTT GAATCCCTCT 
CAGGCTACGT TTCTTGCTCA AAACGATCGT GAAGCGGACA AAAGGATTGT TTTCAGCTAC 
GAACTTCATT TATCAGAGAA TGCGACAGAA GCCCCAATTA TTATCGAAAG TGTCGAAAGG 
CGCATACTTC AGGCCGTCCT AGGGGGTTAC TGTATCACTG GAGACATGCG CAGGCTACAA 
GTTGCCCCCG TCTTCGACTC CAATCCTCCA GATTTTCCGG TTGGTAAGTC TGAGTTGACC 
AGGCTTTGCA AAACTCTACC AATCCATAGT CGCTTACCGT TCTCCTTTGT TTCGATAAGG 
CTCTTGTGGC GACAAATGTA CCTTGGTATA CGGCTGGATG ATGGCAACTG GGGAAGATCC 
CGGCCTCTTT TGCAAGGTGA AACAAATTAT TTATGACTCT ATCATCAGTG GCGCGTTGGA 
GGATGTTGAT GGTGTCAGCG AGCTTGTTTA TAAAGAGGTT CGCGTAGCGC CTTGCTATGT 
CTCGGTGGAT GGCCCACCGG GCGGTTCCAT TAGTGCAGTT GAAGGTAGTC GATCCCGTCA 
ATCAAGTAAC TCGGATTCCT CACCAGTGGG GTTTGTAGCC GGAATTTCCC TTTTCGCTGC 
TTTTATTGTT TTTGCAGCGG CCGTGCTGGT AATCAGAAAA CAACATCGCT CCAGTGAGGA 
AGCTAATGTC CAGAATCGCA GTGACATCTC CCCGGATATT TAG 

 

Protein sequence

MFVTLKCTPN IPIIAKYLAT VPGIKRTTKK TLCYLGRLIK ILVVALDKDT MRFASALALL 
TVSSLYQRLA VRRGEFTAGA LEQPGRRRSQ RVGAAHLKLE HFSVNTISLS SSAALDEKES 
IGYEENVPSS IINALGEFDP GGGSTDVPSA VPSKVSSDSP SDTPSDTPQR IIPTFASSSY 
PSLVPTMSTS DVPSSLPSDV PSTVPSDVPS SIPSDVPPTT PSDIPSSVPS DVPSTIPSDV 
PSLFPSDVPS TIQSDFPSSV PSDLPSTIPS DVHSSIPSSV LYSILSDVPN SLSSEVPSEL 
PSYMLANVPS FKPSNVPSFS SIPSAIPTTT SEILTLAMSN LPSSLPSGMM SVPSDLPSIT 
PSNAVLVTSK SPSKMPSNAT STPPSQNPSR TPNGYPSFRP DPWPTQLPIS KMPTASPLFA 
PTFTQNEGTC DGDGYTLNPS QATFLAQNDR EADKRIVFSY ELHLSENATE APIIIESVER 
RILQAVLGGY CITGDMRRLQ VAPVFDSNPP DFPVGSCGDK CTLVYGWMMA TGEDPGLFCK 
VKQIIYDSII SGALEDVDGV SELVYKEVRV APCYVSVDGP PGGSISAVEG SRSRQSSNSD 
SSPVGFVAGI SLFAAFIVFA AAVLVIRKQH RSSEEANVQN RSDISPDI