16 homologs were found in PanDaTox collection
for query gene PC1_3156 on replicon NC_012917
Organism: Pectobacterium carotovorum subsp. carotovorum PC1



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_012917  PC1_3156  regulatory CII family protein  100 
 
 		 169 aa  348  3e-95  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009436  Ent638_3511  phage regulatory CII family protein  55.36 
 
 		 169 aa  212  1.9999999999999998e-54  Enterobacter sp. 638  Bacteria  normal  0.0375235  normal  0.0330317 
 
 
-
 
NC_009436  Ent638_1344  phage regulatory CII family protein  54.44 
 
 		 169 aa  206  1e-52  Enterobacter sp. 638  Bacteria  normal  0.0698035  normal  0.639346 
 
 
-
 
NC_011149  SeAg_B2880  phage regulatory protein  55.36 
 
 		 169 aa  205  2e-52  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  0.681066  n/a   
 
 
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NC_010468  EcolC_2791  regulatory CII family protein  55.95 
 
 		 169 aa  202  1e-51  Escherichia coli ATCC 8739  Bacteria  normal  0.0447096  normal  0.027037 
 
 
-
 
NC_009800  EcHS_A0913  phage regulatory protein CII (CP76)  55.95 
 
 		 169 aa  202  2e-51  Escherichia coli HS  Bacteria  hitchhiker  0.000458849  n/a   
 
 
-
 
NC_010465  YPK_0885  regulatory CII family protein  60 
 
 		 177 aa  200  6e-51  Yersinia pseudotuberculosis YPIII  Bacteria  normal  1  n/a   
 
 
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NC_011080  SNSL254_A2948  regulatory protein CII bacteriophage 186  55.41 
 
 		 167 aa  184  6e-46  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  0.19102  hitchhiker  1.7132300000000003e-24 
 
 
-
 
NC_011083  SeHA_C3504  regulatory protein CII bacteriophage 186  54.78 
 
 		 167 aa  184  6e-46  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  0.359957  hitchhiker  2.61272e-20 
 
 
-
 
CP001509  ECD_00819  conserved hypothetical protein  61.06 
 
 		 481 aa  155  3e-37  Escherichia coli BL21(DE3)  Bacteria  normal  0.29421  n/a   
 
 
-
 
NC_012892  B21_00835  hypothetical protein  61.06 
 
 		 481 aa  155  3e-37  Escherichia coli BL21  Bacteria  normal  0.40375  n/a   
 
 
-
 
NC_009784  VIBHAR_05012  hypothetical protein  35.4 
 
 		 179 aa  90.9  9e-18  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_008322  Shewmr7_0702  phage regulatory CII family protein  31.65 
 
 		 187 aa  77.8  0.00000000000006  Shewanella sp. MR-7  Bacteria  normal  1  hitchhiker  0.000290373 
 
 
-
 
NC_009456  VC0395_1074  phage regulatory protein CII (CP76)  24.32 
 
 		 179 aa  64.3  0.0000000007  Vibrio cholerae O395  Bacteria  normal  1  n/a   
 
 
-
 
NC_009052  Sbal_1271  phage regulatory CII family protein  29.01 
 
 		 188 aa  61.2  0.000000006  Shewanella baltica OS155  Bacteria  normal  0.522635  n/a   
 
 
-
 
NC_011312  VSAL_I1012  phage regulatory protein CII  26.58 
 
 		 180 aa  53.5  0.000001  Aliivibrio salmonicida LFI1238  Bacteria  normal  1  n/a   
 
 
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