13 homologs were found in PanDaTox collection
for query gene PC1_0846 on replicon NC_012917
Organism: Pectobacterium carotovorum subsp. carotovorum PC1



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_012917  PC1_0846  hypothetical protein  100 
 
 		 79 aa  161  3e-39  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.418454  n/a   
 
 
-
 
NC_012880  Dd703_3049  hypothetical protein  87.84 
 
 		 74 aa  129  1.0000000000000001e-29  Dickeya dadantii Ech703  Bacteria  normal  1  n/a   
 
 
-
 
NC_012880  Dd703_3430  Protein of unknown function DUF1778  50.52 
 
 		 97 aa  86.7  9e-17  Dickeya dadantii Ech703  Bacteria  normal  0.410237  n/a   
 
 
-
 
NC_012880  Dd703_3083  Protein of unknown function DUF1778  49.48 
 
 		 97 aa  82.8  0.000000000000002  Dickeya dadantii Ech703  Bacteria  normal  1  n/a   
 
 
-
 
NC_011080  SNSL254_A4663  hypothetical protein  47.42 
 
 		 97 aa  79  0.00000000000002  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  0.316617  normal  1 
 
 
-
 
NC_011205  SeD_A4712  hypothetical protein  47.42 
 
 		 97 aa  79  0.00000000000002  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  0.0574447  normal  1 
 
 
-
 
NC_011094  SeSA_A4572  hypothetical protein  47.42 
 
 		 97 aa  78.6  0.00000000000003  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.0336291  normal  0.326254 
 
 
-
 
NC_012912  Dd1591_3548  Protein of unknown function DUF1778  46.39 
 
 		 97 aa  78.6  0.00000000000003  Dickeya zeae Ech1591  Bacteria  normal  0.0214549  n/a   
 
 
-
 
NC_010498  EcSMS35_2043  hypothetical protein  45.36 
 
 		 97 aa  77.4  0.00000000000007  Escherichia coli SMS-3-5  Bacteria  normal  0.0191203  hitchhiker  0.00751766 
 
 
-
 
NC_012560  Avin_39810  hypothetical protein  38.14 
 
 		 97 aa  63.5  0.000000001  Azotobacter vinelandii DJ  Bacteria  normal  0.443766  n/a   
 
 
-
 
NC_008781  Pnap_1572  hypothetical protein  40 
 
 		 94 aa  60.5  0.000000007  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.271539  normal  1 
 
 
-
 
NC_009484  Acry_0280  hypothetical protein  34.69 
 
 		 109 aa  50.4  0.000007  Acidiphilium cryptum JF-5  Bacteria  normal  1  n/a   
 
 
-
 
NC_007961  Nham_4586  CopG-like DNA-binding  40 
 
 		 96 aa  41.2  0.005  Nitrobacter hamburgensis X14  Bacteria  normal  1  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>