7 homologs were found in PanDaTox collection
for query gene Noca_4907 on replicon NC_008697
Organism: Nocardioides sp. JS614



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008697  Noca_4907    100 
 
 
610 bp  1209    Nocardioides sp. JS614  Bacteria  normal  0.298598  normal  0.62609 
 
 
-
 
NC_013757  Gobs_1397  Resolvase domain protein  83.08 
 
 
630 bp  291  1e-76  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.954133  n/a   
 
 
-
 
NC_013235  Namu_3655  Resolvase domain protein  84.28 
 
 
639 bp  117  4.0000000000000004e-24  Nakamurella multipartita DSM 44233  Bacteria  normal  0.0554731  normal  0.301287 
 
 
-
 
NC_013235  Namu_3572  Resolvase domain protein  83.33 
 
 
642 bp  103  6e-20  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.000252709  hitchhiker  0.00189094 
 
 
-
 
NC_013169  Ksed_25710  site-specific recombinase, DNA invertase Pin  93.62 
 
 
606 bp  69.9  0.0000000008  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_4773    91.89 
 
 
674 bp  50.1  0.0007  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_014151  Cfla_3040  ABC transporter related protein  93.75 
 
 
1590 bp  48.1  0.003  Cellulomonas flavigena DSM 20109  Bacteria  normal  normal 
 
 
-
 
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