58 homologs were found in PanDaTox collection
for query gene Noca_3551 on replicon NC_008699
Organism: Nocardioides sp. JS614



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_008699  Noca_3551  succinate dehydrogenase subunit C  100 
 
 		 233 aa  461  1e-129  Nocardioides sp. JS614  Bacteria  normal  1  n/a   
 
 
-
 
NC_007333  Tfu_2453  succinate dehydrogenase subunit C  44.77 
 
 		 238 aa  199  1.9999999999999998e-50  Thermobifida fusca YX  Bacteria  normal  1  n/a   
 
 
-
 
NC_013169  Ksed_23340  succinate dehydrogenase/fumarate reductase cytochrome b subunit, b558 family  50.46 
 
 		 231 aa  199  3e-50  Kytococcus sedentarius DSM 20547  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007777  Francci3_3465  succinate dehydrogenase subunit C  46.12 
 
 		 246 aa  191  1e-47  Frankia sp. CcI3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013757  Gobs_1054  succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family  40.45 
 
 		 231 aa  187  1e-46  Geodermatophilus obscurus DSM 43160  Bacteria  normal  1  n/a   
 
 
-
 
NC_013131  Caci_0384  succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family  44.04 
 
 		 234 aa  180  1e-44  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.556008  normal  0.820054 
 
 
-
 
NC_014210  Ndas_3923  succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family  41.18 
 
 		 235 aa  180  1e-44  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013595  Sros_8458  succinate dehydrogenase, cytochrome b subunit  48.15 
 
 		 253 aa  177  9e-44  Streptosporangium roseum DSM 43021  Bacteria  normal  0.70376  normal  1 
 
 
-
 
NC_013947  Snas_5226  succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family  47.73 
 
 		 232 aa  177  1e-43  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.659041  normal  1 
 
 
-
 
NC_009921  Franean1_1278  succinate dehydrogenase/fumarate reductase cytochrome b subunit  45.21 
 
 		 234 aa  172  3.9999999999999995e-42  Frankia sp. EAN1pec  Bacteria  normal  1  normal  0.563199 
 
 
-
 
NC_009380  Strop_1710  succinate dehydrogenase/fumarate reductase cytochrome b subunit  41.36 
 
 		 227 aa  171  5.999999999999999e-42  Salinispora tropica CNB-440  Bacteria  normal  0.0407721  normal  0.47892 
 
 
-
 
NC_009953  Sare_1707  succinate dehydrogenase/fumarate reductase cytochrome b subunit  41.82 
 
 		 230 aa  163  2.0000000000000002e-39  Salinispora arenicola CNS-205  Bacteria  normal  1  hitchhiker  0.00155149 
 
 
-
 
NC_013510  Tcur_1123  succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family  42.34 
 
 		 232 aa  164  2.0000000000000002e-39  Thermomonospora curvata DSM 43183  Bacteria  normal  1  n/a   
 
 
-
 
NC_009767  Rcas_3079  succinate dehydrogenase/fumarate reductase cytochrome b subunit  42.47 
 
 		 226 aa  163  2.0000000000000002e-39  Roseiflexus castenholzii DSM 13941  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009523  RoseRS_2400  succinate dehydrogenase/fumarate reductase cytochrome b subunit  43.38 
 
 		 226 aa  147  1.0000000000000001e-34  Roseiflexus sp. RS-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009972  Haur_1734  succinate dehydrogenase/fumarate reductase cytochrome b subunit  40.62 
 
 		 223 aa  143  3e-33  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.776584  n/a   
 
 
-
 
NC_011831  Cagg_1576  succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family  37.07 
 
 		 239 aa  138  6e-32  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.790909  normal  1 
 
 
-
 
NC_013739  Cwoe_5262  succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family  37.33 
 
 		 256 aa  136  3.0000000000000003e-31  Conexibacter woesei DSM 14684  Bacteria  normal  1  normal  0.277764 
 
 
-
 
NC_009675  Anae109_2602  succinate dehydrogenase/fumarate reductase cytochrome b subunit  38.56 
 
 		 230 aa  132  5e-30  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009483  Gura_3257  succinate dehydrogenase/fumarate reductase cytochrome b subunit  33.18 
 
 		 219 aa  129  4.0000000000000003e-29  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.000000103645  n/a   
 
 
-
 
NC_011891  A2cp1_2817  succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family  38.46 
 
 		 221 aa  127  1.0000000000000001e-28  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.893711  n/a   
 
 
-
 
NC_007760  Adeh_2636  succinate dehydrogenase subunit C  38.01 
 
 		 232 aa  125  5e-28  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.189962  n/a   
 
 
-
 
NC_011145  AnaeK_2722  succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family  37.56 
 
 		 221 aa  125  8.000000000000001e-28  Anaeromyxobacter sp. K  Bacteria  normal  1  n/a   
 
 
-
 
NC_011145  AnaeK_3020  succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family  35.56 
 
 		 221 aa  123  2e-27  Anaeromyxobacter sp. K  Bacteria  normal  0.197929  n/a   
 
 
-
 
NC_011891  A2cp1_3127  succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family  35.56 
 
 		 221 aa  123  2e-27  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_011146  Gbem_3334  succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family  34.8 
 
 		 221 aa  121  9e-27  Geobacter bemidjiensis Bem  Bacteria  decreased coverage  0.0000562871  n/a   
 
 
-
 
NC_010571  Oter_0671  succinate dehydrogenase/fumarate reductase cytochrome b subunit  36.89 
 
 		 253 aa  120  9.999999999999999e-27  Opitutus terrae PB90-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007498  Pcar_0446  succinate dehydrogenase/fumarate reductase, cytochrome b subunit  35.22 
 
 		 223 aa  119  3.9999999999999996e-26  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  0.0000000043641  n/a   
 
 
-
 
NC_012918  GM21_0912  succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family  33.48 
 
 		 221 aa  118  7.999999999999999e-26  Geobacter sp. M21  Bacteria  n/a    hitchhiker  8.63584e-33 
 
 
-
 
NC_007760  Adeh_2934  succinate dehydrogenase subunit C  34.65 
 
 		 221 aa  118  9.999999999999999e-26  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  1  n/a   
 
 
-
 
NC_010814  Glov_2214  succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family  33.78 
 
 		 222 aa  115  6e-25  Geobacter lovleyi SZ  Bacteria  hitchhiker  0.00000205713  n/a   
 
 
-
 
NC_013440  Hoch_5881  succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family  34.96 
 
 		 228 aa  113  3e-24  Haliangium ochraceum DSM 14365  Bacteria  normal  0.0369538  normal  1 
 
 
-
 
NC_009943  Dole_1555  succinate dehydrogenase/fumarate reductase cytochrome b subunit  33.8 
 
 		 212 aa  112  5e-24  Desulfococcus oleovorans Hxd3  Bacteria  normal  1  n/a   
 
 
-
 
NC_007517  Gmet_2397  succinate dehydrogenase subunit C  32.44 
 
 		 220 aa  112  6e-24  Geobacter metallireducens GS-15  Bacteria  hitchhiker  0.000000000000157614  normal  1 
 
 
-
 
NC_010655  Amuc_0986  succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family  32.89 
 
 		 233 aa  109  4.0000000000000004e-23  Akkermansia muciniphila ATCC BAA-835  Bacteria  normal  0.190764  normal  0.959903 
 
 
-
 
NC_002939  GSU1176  fumarate reductase, cytochrome b subunit, putative  32.44 
 
 		 220 aa  105  5e-22  Geobacter sulfurreducens PCA  Bacteria  decreased coverage  0.000804206  n/a   
 
 
-
 
NC_008609  Ppro_2483  succinate dehydrogenase/fumarate reductase cytochrome b subunit  29.02 
 
 		 221 aa  103  3e-21  Pelobacter propionicus DSM 2379  Bacteria  hitchhiker  0.00000000324383  n/a   
 
 
-
 
NC_011060  Ppha_2853  succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family  29.63 
 
 		 220 aa  97.1  2e-19  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_013061  Phep_3265  succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family  27.88 
 
 		 224 aa  86.7  3e-16  Pedobacter heparinus DSM 2366  Bacteria  normal  0.0102296  normal  0.074852 
 
 
-
 
NC_008639  Cpha266_0102  succinate dehydrogenase subunit C  28.88 
 
 		 242 aa  86.7  3e-16  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  1  n/a   
 
 
-
 
NC_013730  Slin_5011  succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family  29.07 
 
 		 231 aa  85.5  7e-16  Spirosoma linguale DSM 74  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007514  Cag_1935  succinate dehydrogenase, cytochrome b558 subunit  34.81 
 
 		 221 aa  85.1  9e-16  Chlorobium chlorochromatii CaD3  Bacteria  normal  1  n/a   
 
 
-
 
NC_014151  Cfla_1918  succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family  30.94 
 
 		 248 aa  82.4  0.000000000000005  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.48387  normal  1 
 
 
-
 
NC_010803  Clim_2443  succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family  26.48 
 
 		 231 aa  80.9  0.00000000000001  Chlorobium limicola DSM 245  Bacteria  normal  1  n/a   
 
 
-
 
NC_013132  Cpin_6536  succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family  29.87 
 
 		 229 aa  80.9  0.00000000000001  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.0147302  normal  0.421545 
 
 
-
 
NC_013162  Coch_0242  succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family  28.77 
 
 		 224 aa  81.3  0.00000000000001  Capnocytophaga ochracea DSM 7271  Bacteria  normal  0.463951  n/a   
 
 
-
 
NC_014148  Plim_2451  succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family  31.34 
 
 		 263 aa  75.1  0.0000000000008  Planctomyces limnophilus DSM 3776  Bacteria  normal  0.260267  n/a   
 
 
-
 
NC_013037  Dfer_3969  succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family  31.19 
 
 		 223 aa  73.9  0.000000000002  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.539858  normal  0.938313 
 
 
-
 
NC_007512  Plut_2082  succinate dehydrogenase, cytochrome b558 subunit  30.56 
 
 		 217 aa  74.3  0.000000000002  Chlorobium luteolum DSM 273  Bacteria  normal  1  normal  1 
 
 
-
 
NC_002950  PG1616  hypothetical protein  31.44 
 
 		 230 aa  73.2  0.000000000003  Porphyromonas gingivalis W83  Bacteria  n/a    normal  1 
 
 
-
 
NC_009441  Fjoh_0677  succinate dehydrogenase/fumarate reductase cytochrome b subunit  28.9 
 
 		 221 aa  72.8  0.000000000004  Flavobacterium johnsoniae UW101  Bacteria  normal  0.330554  n/a   
 
 
-
 
NC_014230  CA2559_04700  Succinate dehydrogenase, cytochrome b558 subunit  26.94 
 
 		 239 aa  73.2  0.000000000004  Croceibacter atlanticus HTCC2559  Bacteria  normal  0.142799  n/a   
 
 
-
 
NC_008255  CHU_2472  succinate dehydrogenase subunit C  26.96 
 
 		 234 aa  70.1  0.00000000003  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  1  normal  0.088296 
 
 
-
 
NC_013061  Phep_0210  succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family  29.86 
 
 		 209 aa  66.2  0.0000000004  Pedobacter heparinus DSM 2366  Bacteria  normal  1  normal  0.178557 
 
 
-
 
NC_008820  P9303_01681  succinate dehydrogenase  25.81 
 
 		 210 aa  51.2  0.00001  Prochlorococcus marinus str. MIT 9303  Bacteria  n/a    normal  1 
 
 
-
 
NC_007516  Syncc9605_2086  succinate dehydrogenase subunit C  28.1 
 
 		 208 aa  51.2  0.00001  Synechococcus sp. CC9605  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008009  Acid345_2570  succinate dehydrogenase subunit C  24.53 
 
 		 253 aa  49.7  0.00004  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013411  GYMC61_0843  succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family  24.6 
 
 		 202 aa  45.4  0.0008  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
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