43 homologs were found in PanDaTox collection
for query gene Mnod_6001 on replicon NC_011894
Organism: Methylobacterium nodulans ORS 2060



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_011894  Mnod_6001  beta-ribofuranosylaminobenzene 5'-phosphate synthase family  100 
 
 		 333 aa  638    Methylobacterium nodulans ORS 2060  Bacteria  normal  0.498595  n/a   
 
 
-
 
NC_010511  M446_5777  beta-ribofuranosylaminobenzene 5'-phosphate synthase  84.33 
 
 		 323 aa  428  1e-119  Methylobacterium sp. 4-46  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010172  Mext_1828  beta-ribofuranosylaminobenzene 5'-phosphate synthase  67.83 
 
 		 340 aa  355  3.9999999999999996e-97  Methylobacterium extorquens PA1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011757  Mchl_2163  beta-ribofuranosylaminobenzene 5'-phosphate synthase family  67.52 
 
 		 340 aa  355  5e-97  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.0673427  normal  0.202366 
 
 
-
 
NC_010725  Mpop_1779  beta-ribofuranosylaminobenzene 5'-phosphate synthase family  65.11 
 
 		 333 aa  350  1e-95  Methylobacterium populi BJ001  Bacteria  normal  0.0409011  normal  1 
 
 
-
 
NC_010505  Mrad2831_0527  beta-ribofuranosylaminobenzene 5'-phosphate synthase  64.04 
 
 		 325 aa  333  2e-90  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  1  normal  0.856491 
 
 
-
 
NC_002977  MCA2861  GHMP family kinase  47.68 
 
 		 347 aa  268  8.999999999999999e-71  Methylococcus capsulatus str. Bath  Bacteria  normal  0.480231  n/a   
 
 
-
 
NC_007947  Mfla_1661  beta-ribofuranosylaminobenzene 5'-phosphate synthase  45.6 
 
 		 310 aa  256  4e-67  Methylobacillus flagellatus KT  Bacteria  hitchhiker  0.00577565  normal  0.473342 
 
 
-
 
NC_011666  Msil_2384  beta-ribofuranosylaminobenzene 5'-phosphate synthase family  50.16 
 
 		 339 aa  254  2.0000000000000002e-66  Methylocella silvestris BL2  Bacteria  n/a    normal  1 
 
 
-
 
NC_010625  Bphy_5949  beta-ribofuranosylaminobenzene 5'-phosphate synthase  47.31 
 
 		 339 aa  248  7e-65  Burkholderia phymatum STM815  Bacteria  normal  1  decreased coverage  0.00300733 
 
 
-
 
NC_007952  Bxe_B2430  beta-ribofuranosylaminobenzene 5'-phosphate synthase  45.2 
 
 		 342 aa  224  2e-57  Burkholderia xenovorans LB400  Bacteria  normal  0.100364  normal  0.840747 
 
 
-
 
NC_010625  Bphy_6481  beta-ribofuranosylaminobenzene 5'-phosphate synthase  44.34 
 
 		 355 aa  223  3e-57  Burkholderia phymatum STM815  Bacteria  normal  1  normal  0.321836 
 
 
-
 
NC_009720  Xaut_3535  beta-ribofuranosylaminobenzene 5'-phosphate synthase  42.46 
 
 		 322 aa  218  2e-55  Xanthobacter autotrophicus Py2  Bacteria  normal  1  normal  0.904151 
 
 
-
 
NC_012791  Vapar_3085  beta-ribofuranosylaminobenzene 5'-phosphate synthase family  42.68 
 
 		 348 aa  209  5e-53  Variovorax paradoxus S110  Bacteria  normal  1  n/a   
 
 
-
 
NC_008825  Mpe_A2606  beta-ribofuranosylaminobenzene 5'-phosphate synthase  46.5 
 
 		 342 aa  185  1.0000000000000001e-45  Methylibium petroleiphilum PM1  Bacteria  normal  0.614879  normal  1 
 
 
-
 
NC_010524  Lcho_3153  beta-ribofuranosylaminobenzene 5'-phosphate synthase  42.61 
 
 		 375 aa  179  5.999999999999999e-44  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  1 
 
 
-
 
NC_009051  Memar_0701  beta-ribofuranosylaminobenzene 5'-phosphate synthase  37.58 
 
 		 515 aa  157  2e-37  Methanoculleus marisnigri JR1  Archaea  normal  0.187582  n/a   
 
 
-
 
NC_007955  Mbur_1563  beta-ribofuranosylaminobenzene 5'-phosphate synthase  32.83 
 
 		 319 aa  155  7e-37  Methanococcoides burtonii DSM 6242  Archaea  hitchhiker  0.00013135  n/a   
 
 
-
 
NC_008553  Mthe_0935  beta-ribofuranosylaminobenzene 5'-phosphate synthase  32.73 
 
 		 509 aa  155  7e-37  Methanosaeta thermophila PT  Archaea  normal  1  n/a   
 
 
-
 
NC_011832  Mpal_1624  beta-ribofuranosylaminobenzene 5'-phosphate synthase family  33.94 
 
 		 524 aa  155  1e-36  Methanosphaerula palustris E1-9c  Archaea  normal  0.931737  normal  0.205569 
 
 
-
 
NC_007355  Mbar_A0806  beta-ribofuranosylaminobenzene 5'-phosphate synthase  30.97 
 
 		 321 aa  150  2e-35  Methanosarcina barkeri str. Fusaro  Archaea  normal  1  normal  1 
 
 
-
 
NC_013158  Huta_2356  beta-ribofuranosylaminobenzene 5'-phosphate synthase family  36.36 
 
 		 322 aa  143  5e-33  Halorhabdus utahensis DSM 12940  Archaea  normal  0.37342  n/a   
 
 
-
 
NC_007796  Mhun_1148  GHMP kinase group 1  29.38 
 
 		 519 aa  141  9.999999999999999e-33  Methanospirillum hungatei JF-1  Archaea  normal  0.820316  normal  1 
 
 
-
 
NC_009135  MmarC5_1394  beta-ribofuranosylaminobenzene 5'-phosphate synthase  30.07 
 
 		 325 aa  138  1e-31  Methanococcus maripaludis C5  Archaea  normal  0.813401  n/a   
 
 
-
 
NC_009975  MmarC6_0674  beta-ribofuranosylaminobenzene 5'-phosphate synthase  30.07 
 
 		 325 aa  137  3.0000000000000003e-31  Methanococcus maripaludis C6  Archaea  normal  0.2271  n/a   
 
 
-
 
NC_009634  Mevan_1290  beta-ribofuranosylaminobenzene 5'-phosphate synthase  27.38 
 
 		 325 aa  135  7.000000000000001e-31  Methanococcus vannielii SB  Archaea  normal  1  n/a   
 
 
-
 
NC_009637  MmarC7_1282  beta-ribofuranosylaminobenzene 5'-phosphate synthase  29.73 
 
 		 325 aa  135  8e-31  Methanococcus maripaludis C7  Archaea  normal  0.232636  normal  1 
 
 
-
 
NC_013743  Htur_2109  beta-ribofuranosylaminobenzene 5'-phosphate synthase family  37.93 
 
 		 328 aa  133  3.9999999999999996e-30  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_012029  Hlac_2038  beta-ribofuranosylaminobenzene 5'-phosphate synthase family  38.01 
 
 		 333 aa  132  6e-30  Halorubrum lacusprofundi ATCC 49239  Archaea  normal  0.172756  normal  0.249661 
 
 
-
 
NC_007355  Mbar_A1222  beta-ribofuranosylaminobenzene 5'-phosphate synthase  29.2 
 
 		 318 aa  131  2.0000000000000002e-29  Methanosarcina barkeri str. Fusaro  Archaea  normal  1  normal  1 
 
 
-
 
NC_013202  Hmuk_1348  beta-ribofuranosylaminobenzene 5'-phosphate synthase family  36.14 
 
 		 326 aa  129  6e-29  Halomicrobium mukohataei DSM 12286  Archaea  normal  1  normal  0.0110253 
 
 
-
 
NC_013922  Nmag_0626  beta-ribofuranosylaminobenzene 5'-phosphate synthase family  34.93 
 
 		 345 aa  124  2e-27  Natrialba magadii ATCC 43099  Archaea  normal  1  n/a   
 
 
-
 
NC_009635  Maeo_0244  beta-ribofuranosylaminobenzene 5'-phosphate synthase  22.92 
 
 		 335 aa  124  2e-27  Methanococcus aeolicus Nankai-3  Archaea  normal  1  n/a   
 
 
-
 
NC_014148  Plim_2423  beta-ribofuranosylaminobenzene 5'-phosphate synthase family  29.54 
 
 		 325 aa  119  7e-26  Planctomyces limnophilus DSM 3776  Bacteria  normal  0.165612  n/a   
 
 
-
 
NC_008345  Sfri_3142  beta-ribofuranosylaminobenzene 5'-phosphate synthase family protein  19.81 
 
 		 328 aa  81.6  0.00000000000002  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.336042  n/a   
 
 
-
 
NC_009440  Msed_1616  beta-ribofuranosylaminobenzene 5'-phosphate synthase  26.56 
 
 		 284 aa  79.7  0.00000000000006  Metallosphaera sedula DSM 5348  Archaea  normal  1  normal  1 
 
 
-
 
CP001800  Ssol_1345  beta-ribofuranosylaminobenzene 5'-phosphate synthase family  25.08 
 
 		 292 aa  74.7  0.000000000002  Sulfolobus solfataricus 98/2  Archaea  normal  0.380612  n/a   
 
 
-
 
NC_008254  Meso_2350  beta-ribofuranosylaminobenzene 5'-phosphate synthase  26.41 
 
 		 327 aa  73.2  0.000000000005  Chelativorans sp. BNC1  Bacteria  normal  1  n/a   
 
 
-
 
NC_007964  Nham_0792  sugar kinase-like protein  25.31 
 
 		 310 aa  67.4  0.0000000003  Nitrobacter hamburgensis X14  Bacteria  normal  0.178094  n/a   
 
 
-
 
NC_009953  Sare_0579  beta-ribofuranosylaminobenzene 5'-phosphate synthase  29.56 
 
 		 337 aa  66.2  0.0000000006  Salinispora arenicola CNS-205  Bacteria  normal  0.195323  normal  0.392757 
 
 
-
 
NC_013216  Dtox_2738  sugar kinase-like protein  23.01 
 
 		 427 aa  50.1  0.00006  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  1  normal  0.272805 
 
 
-
 
NC_009712  Mboo_1451  GHMP kinase  23.95 
 
 		 359 aa  46.2  0.0008  Candidatus Methanoregula boonei 6A8  Archaea  normal  0.0518145  normal  0.0558976 
 
 
-
 
NC_011832  Mpal_1826  GHMP kinase  23.38 
 
 		 357 aa  42.7  0.009  Methanosphaerula palustris E1-9c  Archaea  normal  1  normal  0.725882 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>