18 homologs were found in PanDaTox collection
for query gene Mnod_2449 on replicon NC_011894
Organism: Methylobacterium nodulans ORS 2060



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011894  Mnod_2449  putative Mu-like prophage DNA circulation protein  100 
 
 
159 aa  329  8e-90  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_6587  putative Mu-like prophage DNA circulation protein  34.85 
 
 
422 aa  80.9  0.000000000000006  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_009436  Ent638_2588  DNA circulation family protein  34.71 
 
 
438 aa  62.4  0.000000002  Enterobacter sp. 638  Bacteria  normal  normal  0.0328137 
 
 
-
 
NC_007951  Bxe_A3051  putative bacteriophage DNA circulation protein, Mu-like  33.56 
 
 
475 aa  62  0.000000003  Burkholderia xenovorans LB400  Bacteria  normal  0.273853  hitchhiker  0.000025391 
 
 
-
 
NC_002947  PP_3864  phage FluMu DNA circulation protein, putative  29.66 
 
 
420 aa  58.9  0.00000003  Pseudomonas putida KT2440  Bacteria  normal  normal  0.891467 
 
 
-
 
NC_010465  YPK_0189  DNA circulation family protein  31.4 
 
 
439 aa  57  0.0000001  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_0744  DNA circulation family protein  31.93 
 
 
446 aa  55.8  0.0000002  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_004578  PSPTO_0581  DNA circulation protein, putative  27.92 
 
 
607 aa  52.4  0.000003  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.519076  n/a   
 
 
-
 
NC_007005  Psyr_4591  DNA circulation, N-terminal  26.62 
 
 
470 aa  51.2  0.000005  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.422243  normal 
 
 
-
 
NC_011094  SeSA_A2252  tail/DNA circulation protein  28.46 
 
 
446 aa  48.1  0.00004  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal  0.257831 
 
 
-
 
NC_011094  SeSA_A4477  tail/DNA circulation protein  28.46 
 
 
446 aa  48.1  0.00004  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  hitchhiker  0.00305287 
 
 
-
 
NC_011205  SeD_A2255  tail/DNA circulation protein  28.46 
 
 
446 aa  48.5  0.00004  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  hitchhiker  0.000334711 
 
 
-
 
NC_007948  Bpro_3737  DNA circulation-like  30.28 
 
 
415 aa  45.4  0.0003  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_010465  YPK_3117  DNA circulation family protein  31.54 
 
 
468 aa  44.7  0.0006  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_009436  Ent638_1654  DNA circulation family protein  36.07 
 
 
153 aa  44.3  0.0007  Enterobacter sp. 638  Bacteria  normal  normal 
 
 
-
 
NC_009457  VC0395_A0692  DNA circulation protein  35.9 
 
 
439 aa  42  0.004  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_009457  VC0395_A0745  DNA circulation protein  35.9 
 
 
439 aa  42  0.004  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_1158  DNA circulation-like  25.86 
 
 
411 aa  41.6  0.004  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
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