16 homologs were found in PanDaTox collection
for query gene Mext_4512 on replicon NC_010172
Organism: Methylobacterium extorquens PA1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010172  Mext_4512  hypothetical protein  100 
 
 
182 aa  354  2.9999999999999997e-97  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_4975  hypothetical protein  98.9 
 
 
182 aa  350  5e-96  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.201692 
 
 
-
 
NC_010725  Mpop_5027  hypothetical protein  77.53 
 
 
201 aa  263  7e-70  Methylobacterium populi BJ001  Bacteria  normal  normal  0.565398 
 
 
-
 
NC_010505  Mrad2831_1018  PAS domain-containing protein  28.24 
 
 
195 aa  72.8  0.000000000003  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.011057  normal  0.147153 
 
 
-
 
NC_010505  Mrad2831_4390  PAS domain-containing protein  30.81 
 
 
200 aa  69.7  0.00000000002  Methylobacterium radiotolerans JCM 2831  Bacteria  decreased coverage  0.000850983  normal  0.838012 
 
 
-
 
NC_010505  Mrad2831_2325  PAS domain-containing protein  37.61 
 
 
204 aa  60.1  0.00000002  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.347641  normal  0.764067 
 
 
-
 
NC_010505  Mrad2831_4253  PAS domain-containing protein  30.29 
 
 
202 aa  49.3  0.00003  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.486718  normal  0.280959 
 
 
-
 
NC_010510  Mrad2831_6284  PAS domain-containing protein  27.66 
 
 
223 aa  47.8  0.00008  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_010510  Mrad2831_5882  PAS domain-containing protein  28.73 
 
 
202 aa  45.8  0.0003  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.683919 
 
 
-
 
NC_007492  Pfl01_3083  PAS/PAC sensor hybrid histidine kinase  28.21 
 
 
845 aa  44.7  0.0007  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_1761  PAS domain-containing protein  26.8 
 
 
199 aa  44.3  0.001  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_008255  CHU_2895  PAS/PAC sensor hybrid histidine kinase  28.04 
 
 
1324 aa  43.1  0.002  Cytophaga hutchinsonii ATCC 33406  Bacteria  unclonable  0.00000343468  normal  0.0609683 
 
 
-
 
NC_010505  Mrad2831_1503  PAS domain-containing protein  29.34 
 
 
186 aa  43.1  0.002  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.355958  normal 
 
 
-
 
NC_010725  Mpop_5109  PAS fold-3 domain protein  29.94 
 
 
197 aa  42.7  0.002  Methylobacterium populi BJ001  Bacteria  normal  normal  0.924849 
 
 
-
 
NC_011884  Cyan7425_4301  signal transduction histidine kinase  24.36 
 
 
2693 aa  41.6  0.007  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_3532  PAS  27.62 
 
 
691 aa  40.8  0.009  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.804686  normal  0.0772354 
 
 
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