16 homologs were found in PanDaTox collection
for query gene Mchl_4975 on replicon NC_011757
Organism: Methylobacterium chloromethanicum CM4



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011757  Mchl_4975  hypothetical protein  100 
 
 
182 aa  354  2.9999999999999997e-97  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.201692 
 
 
-
 
NC_010172  Mext_4512  hypothetical protein  98.9 
 
 
182 aa  350  5e-96  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_010725  Mpop_5027  hypothetical protein  78.09 
 
 
201 aa  265  4e-70  Methylobacterium populi BJ001  Bacteria  normal  normal  0.565398 
 
 
-
 
NC_010505  Mrad2831_1018  PAS domain-containing protein  28.82 
 
 
195 aa  75.1  0.0000000000006  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.011057  normal  0.147153 
 
 
-
 
NC_010505  Mrad2831_4390  PAS domain-containing protein  31.89 
 
 
200 aa  72.4  0.000000000003  Methylobacterium radiotolerans JCM 2831  Bacteria  decreased coverage  0.000850983  normal  0.838012 
 
 
-
 
NC_010505  Mrad2831_2325  PAS domain-containing protein  37.61 
 
 
204 aa  60.5  0.00000001  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.347641  normal  0.764067 
 
 
-
 
NC_010505  Mrad2831_4253  PAS domain-containing protein  30.36 
 
 
202 aa  52  0.000005  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.486718  normal  0.280959 
 
 
-
 
NC_010510  Mrad2831_6284  PAS domain-containing protein  27.98 
 
 
223 aa  49.3  0.00003  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_010510  Mrad2831_5882  PAS domain-containing protein  29.28 
 
 
202 aa  46.2  0.0003  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.683919 
 
 
-
 
NC_007492  Pfl01_3083  PAS/PAC sensor hybrid histidine kinase  28.21 
 
 
845 aa  44.7  0.0008  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_1761  PAS domain-containing protein  27.84 
 
 
199 aa  43.9  0.001  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_008255  CHU_2895  PAS/PAC sensor hybrid histidine kinase  28.04 
 
 
1324 aa  43.1  0.002  Cytophaga hutchinsonii ATCC 33406  Bacteria  unclonable  0.00000343468  normal  0.0609683 
 
 
-
 
NC_010505  Mrad2831_1503  PAS domain-containing protein  29.34 
 
 
186 aa  43.1  0.002  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.355958  normal 
 
 
-
 
NC_010725  Mpop_5109  PAS fold-3 domain protein  30.51 
 
 
197 aa  42.4  0.003  Methylobacterium populi BJ001  Bacteria  normal  normal  0.924849 
 
 
-
 
NC_007005  Psyr_3532  PAS  28.57 
 
 
691 aa  41.6  0.007  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.804686  normal  0.0772354 
 
 
-
 
NC_011884  Cyan7425_4301  signal transduction histidine kinase  24.36 
 
 
2693 aa  41.2  0.009  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
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