24 homologs were found in PanDaTox collection
for query gene MADE_00033 on replicon NC_011138
Organism: Alteromonas macleodii 'Deep ecotype'



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011138  MADE_00033  CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase  100 
 
 
298 aa  625  1e-178  Alteromonas macleodii 'Deep ecotype'  Bacteria  hitchhiker  0.00158752  n/a   
 
 
-
 
NC_008577  Shewana3_4098  CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase  43.23 
 
 
357 aa  255  6e-67  Shewanella sp. ANA-3  Bacteria  normal  normal  0.333921 
 
 
-
 
NC_008321  Shewmr4_3894  CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase  42.9 
 
 
357 aa  253  2.0000000000000002e-66  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_3986  CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase  43.23 
 
 
358 aa  253  3e-66  Shewanella sp. MR-7  Bacteria  normal  normal  0.0629316 
 
 
-
 
NC_009901  Spea_0114  CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase  42.57 
 
 
351 aa  252  5.000000000000001e-66  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_3893  CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase  43.23 
 
 
352 aa  250  2e-65  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_004347  SO_4680  hypothetical protein  42.57 
 
 
358 aa  249  3e-65  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009665  Shew185_4334  CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase  42.24 
 
 
360 aa  247  2e-64  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_4474  CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase  42.57 
 
 
358 aa  247  2e-64  Shewanella baltica OS195  Bacteria  normal  normal  0.642393 
 
 
-
 
NC_011663  Sbal223_4279  CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase  42.24 
 
 
358 aa  246  3e-64  Shewanella baltica OS223  Bacteria  normal  hitchhiker  0.00898994 
 
 
-
 
NC_008228  Patl_0052  CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase  40.13 
 
 
357 aa  243  1.9999999999999999e-63  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_010513  Xfasm12_0982  hypothetical protein  40.67 
 
 
344 aa  238  1e-61  Xylella fastidiosa M12  Bacteria  normal  n/a   
 
 
-
 
NC_010577  XfasM23_0863  CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase  40 
 
 
344 aa  232  6e-60  Xylella fastidiosa M23  Bacteria  normal  n/a   
 
 
-
 
NC_003910  CPS_4206  CDP-glycerol:Poly(glycerophosphate) glycerophosphotransferase family protein  40.13 
 
 
347 aa  230  3e-59  Colwellia psychrerythraea 34H  Bacteria  normal  0.842341  n/a   
 
 
-
 
NC_010717  PXO_04062  CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase family  34.98 
 
 
351 aa  193  3e-48  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_011071  Smal_3578  CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase  34.69 
 
 
351 aa  176  5e-43  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.106176  normal 
 
 
-
 
NC_013173  Dbac_0113  CDP- glycerol:poly(glycerophosphate)glycerophosph otransferase  23.65 
 
 
594 aa  62.4  0.00000001  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_013174  Jden_1795  CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase  26.53 
 
 
386 aa  51.6  0.00002  Jonesia denitrificans DSM 20603  Bacteria  normal  0.06439  normal 
 
 
-
 
NC_010571  Oter_4156  CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase  25 
 
 
364 aa  51.2  0.00002  Opitutus terrae PB90-1  Bacteria  normal  0.188522  normal  0.22274 
 
 
-
 
NC_009831  Ssed_2966  UDP-N-acetylglucosamine 2-epimerase  25.95 
 
 
379 aa  49.3  0.00007  Shewanella sediminis HAW-EB3  Bacteria  unclonable  0.000000333079  normal  0.0786826 
 
 
-
 
NC_009092  Shew_3696  CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase  26.34 
 
 
338 aa  49.3  0.00008  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_009720  Xaut_1736  UDP-N-acetylglucosamine 2-epimerase  26.11 
 
 
409 aa  46.2  0.0006  Xanthobacter autotrophicus Py2  Bacteria  normal  0.872712  normal 
 
 
-
 
NC_007794  Saro_3149  UDP-N-acetylglucosamine 2-epimerase  23.84 
 
 
372 aa  44.3  0.003  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_50300  hypothetical protein  28.26 
 
 
1694 aa  43.1  0.006  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.0552832  decreased coverage  0.000853187 
 
 
-
 
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