| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2966 |
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| Symbol | |
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| ID | 5613743 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 3594084 |
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| End bp | 3595223 |
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| Gene Length | 1140 bp |
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| Protein Length | 379 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640933906 |
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| Product | UDP-N-acetylglucosamine 2-epimerase |
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| Protein accession | YP_001474701 |
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| Protein GI | 157376101 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0381] UDP-N-acetylglucosamine 2-epimerase |
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| TIGRFAM ID | [TIGR00236] UDP-N-acetylglucosamine 2-epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000333079 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.0786826 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAGATG TAATGAAAGT AATGCTAGTG TTTGGTACGC GACCTGAGGC CATTAAGATG
GCGCCTTTAG TGTTAGCGAT GAAAGCTAAT CCTGGTATTG ATGTGTCCGT TTGTGTTACC
GCACAGCATC GTGAAATGCT TGACCAAGTA CTTGAACTTT TTGATATAGT ACCGGATTTT
GATTTAGATA TCATGAGCCC CGGGCAGGGA TTGACAGAGA TCACCAGCCG GATACTGATA
GGGCTCAAGC CTATTTATGA GCAGGTGCAA CCAGATCTTG TATTAGTTCA TGGTGACACA
TCAACAACGT TATCTGCTAC TTTAGCGGCT TTCTACCAAC AAATTCCAGT GGGTCATGTT
GAGGCTGGTT TAAGAACCGG TAACTTACTA TCCCCTTGGC CAGAAGAGGG GAATCGTAAG
CTTACTGGCA CCATTGCATC ATTACATTTT GCACCTACAG AGACCTCGAA GCAGAATTTA
CTGAATGAGG GTATCGCAGA AGATAAAATA TTTGTTACAG GCAATACTGT TATCGATGCT
CTTTTATTAG TACAAGATAA AGTCACTTCA GATGAATCGC TGAAACATAG CCTGGTTCAG
TTATTTCCGT GGCGTGATAC TAGTAAGCGA TTGGTACTGA TCACTGGACA TCGACGGGAA
AGTTTTGGGG ATGGTTTTGA ACAAATCTGT AAAGCTATTA GTCATTGTGC TGAAAAGTAT
CCCGATGTTC AATTTGTATA CCCGATGCAT TTAAACCCCA ATGTTCGCGG CCCTGTTAAT
AAATATCTTT CAGATATCAA AAATGTATTG TTGATTGAGC CCTTAGATTA TCTACCTTTT
GTGTTTTTAA TGGATCAGTC ACATATTATT TTGACCGATT CTGGTGGTAT TCAGGAAGAG
GCGCCATCTT TAGGGAAGCC TGTACTGGTT ATGCGTGACA CTACCGAACG GCCCGAAGCC
GTTGACGCAG GTACAGTCAA ACTTGTTGGT ACCAATGCCG ATTCTATTGC TGATGCGATT
ACTGTTTTAC TTTCGGATGA GCAAGTATTT AATACAATGT CCAAAGCTCA TAACCCTTAT
GGCGACGGTA ACGCGTGTTC GCGCATTATT TCAGCCATAA GTCATACCGC CTCAAACTAG
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| Protein sequence | MRDVMKVMLV FGTRPEAIKM APLVLAMKAN PGIDVSVCVT AQHREMLDQV LELFDIVPDF
DLDIMSPGQG LTEITSRILI GLKPIYEQVQ PDLVLVHGDT STTLSATLAA FYQQIPVGHV
EAGLRTGNLL SPWPEEGNRK LTGTIASLHF APTETSKQNL LNEGIAEDKI FVTGNTVIDA
LLLVQDKVTS DESLKHSLVQ LFPWRDTSKR LVLITGHRRE SFGDGFEQIC KAISHCAEKY
PDVQFVYPMH LNPNVRGPVN KYLSDIKNVL LIEPLDYLPF VFLMDQSHII LTDSGGIQEE
APSLGKPVLV MRDTTERPEA VDAGTVKLVG TNADSIADAI TVLLSDEQVF NTMSKAHNPY
GDGNACSRII SAISHTASN
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