13 homologs were found in PanDaTox collection
for query gene Lferr_2034 on replicon NC_011206
Organism: Acidithiobacillus ferrooxidans ATCC 53993



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011206  Lferr_2034  hypothetical protein  100 
 
 
335 aa  683    Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  normal 
 
 
-
 
NC_006369  lpl2288  hypothetical protein  27.95 
 
 
502 aa  144  2e-33  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_010814  Glov_0277  filamentation induced by cAMP protein Fic  32.08 
 
 
508 aa  142  9.999999999999999e-33  Geobacter lovleyi SZ  Bacteria  hitchhiker  0.0000636262  n/a   
 
 
-
 
NC_007964  Nham_2833  filamentation induced by cAMP protein Fic  31.25 
 
 
512 aa  140  3.9999999999999997e-32  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_1002  filamentation induced by cAMP protein Fic  29.59 
 
 
531 aa  138  1e-31  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_0191  filamentation induced by cAMP protein Fic  32.53 
 
 
508 aa  135  8e-31  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_007954  Sden_0838  filamentation induced by cAMP protein Fic  27.46 
 
 
505 aa  133  5e-30  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_011757  Mchl_1058  filamentation induced by cAMP protein Fic  28.72 
 
 
529 aa  131  1.0000000000000001e-29  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.620217 
 
 
-
 
NC_008609  Ppro_0217  filamentation induced by cAMP protein Fic  29.25 
 
 
508 aa  130  4.0000000000000003e-29  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_0828  filamentation induced by cAMP protein Fic  31.79 
 
 
509 aa  126  5e-28  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_1106  filamentation induced by cAMP protein Fic  27.7 
 
 
533 aa  121  1.9999999999999998e-26  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_3058  filamentation induced by cAMP protein Fic  27.44 
 
 
541 aa  113  4.0000000000000004e-24  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_011138  MADE_00876  filamentation induced by cAMP protein Fic  27.27 
 
 
447 aa  100  3e-20  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
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