5 homologs were found in PanDaTox collection
for query gene Lcho_0331 on replicon NC_010524
Organism: Leptothrix cholodnii SP-6



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010524  Lcho_0331  anti-sigma-factor antagonist  100 
 
 
105 aa  210  5.999999999999999e-54  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_009483  Gura_2995  Sulfate transporter/antisigma-factor antagonist STAS  29.17 
 
 
120 aa  45.4  0.0003  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_007954  Sden_3295  Sulfate transporter/antisigma-factor antagonist STAS  28.74 
 
 
104 aa  42  0.003  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_010524  Lcho_1534  anti-sigma-factor antagonist  35.96 
 
 
110 aa  40.8  0.006  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.02614 
 
 
-
 
NC_010524  Lcho_3797  anti-sigma-factor antagonist  41.1 
 
 
110 aa  40.4  0.008  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
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