| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1534 |
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| Symbol | |
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| ID | 6161686 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 1626195 |
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| End bp | 1626527 |
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| Gene Length | 333 bp |
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| Protein Length | 110 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 641664289 |
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| Product | anti-sigma-factor antagonist |
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| Protein accession | YP_001790567 |
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| Protein GI | 171058218 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) |
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| TIGRFAM ID | [TIGR00377] anti-anti-sigma factor |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.02614 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACACCG GACACGGCCA GCCGGCGCTG CCCTTCGCCC TCGGCGGCGA GCTGTGCATC
CAGACCGCCG CCGAGCAGCG CCAGGTGCTG ATCGATGCGC TCGGGCAGGC CGACGGCCGT
GACCTCGCGC TCGACCTGCA CGAGATCCAC GGCTGCGACA GCGCCGGCGT GCAGCTGCTG
CTGGCCACCC GCCTGCAGCT GCAGCGCAGC GGCCGGCGCC TGCACCTCGA GGCGCTGAGC
CCGGTGGTGC GCGAGGTCCT GCGCACCTAC GGCCTGCAGG CCCTGTTCGA CAGCCCCCCG
ACGCCCGGCG ACCGACGCGA GACACAGTCA TGA
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| Protein sequence | MDTGHGQPAL PFALGGELCI QTAAEQRQVL IDALGQADGR DLALDLHEIH GCDSAGVQLL
LATRLQLQRS GRRLHLEALS PVVREVLRTY GLQALFDSPP TPGDRRETQS
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