10 homologs were found in PanDaTox collection
for query gene Gmet_2276 on replicon NC_007517
Organism: Geobacter metallireducens GS-15



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007517  Gmet_2276  replication initiation factor  100 
 
 
393 aa  817    Geobacter metallireducens GS-15  Bacteria  decreased coverage  0.00843988  hitchhiker  0.00603168 
 
 
-
 
NC_011146  Gbem_3067  replication initiation factor  70.87 
 
 
390 aa  583  1.0000000000000001e-165  Geobacter bemidjiensis Bem  Bacteria  normal  0.0900674  n/a   
 
 
-
 
NC_014148  Plim_2650  replication initiation factor  38.83 
 
 
429 aa  265  1e-69  Planctomyces limnophilus DSM 3776  Bacteria  normal  0.624324  n/a   
 
 
-
 
NC_009455  DehaBAV1_0084  hypothetical protein  26.49 
 
 
383 aa  105  2e-21  Dehalococcoides sp. BAV1  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_1039  hypothetical protein  31.31 
 
 
468 aa  89.4  1e-16  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_009719  Plav_0100  hypothetical protein  34.38 
 
 
368 aa  82.4  0.00000000000001  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal  0.243385 
 
 
-
 
NC_014148  Plim_2011  hypothetical protein  28.25 
 
 
431 aa  82.4  0.00000000000001  Planctomyces limnophilus DSM 3776  Bacteria  normal  n/a   
 
 
-
 
NC_002936  DET1477  hypothetical protein  27.8 
 
 
344 aa  79.7  0.00000000000009  Dehalococcoides ethenogenes 195  Bacteria  normal  0.192207  n/a   
 
 
-
 
NC_009455  DehaBAV1_1041  hypothetical protein  26.7 
 
 
386 aa  74.3  0.000000000003  Dehalococcoides sp. BAV1  Bacteria  normal  n/a   
 
 
-
 
NC_011891  A2cp1_3699  hypothetical protein  32.1 
 
 
414 aa  65.9  0.000000001  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
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